RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CDK20Q8IZL9 346 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 FNDC9Q8TBE3 224 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 CANT1Q8WVQ1 401 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 KTI12Q96EK9 354 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 RSRC1Q96IZ7 334 aaKnown RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 TACO1Q9BSH4 297 aaKnown RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 RNF122Q9H9V4 155 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 CCM2LQ9NUG4 571 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 RHCGQ9UBD6 479 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 CORINQ9Y5Q5 1042 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 IGKV1D-42A0A075B6H8 117 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 NBPF19A0A087WUL8 3843 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 GADD45GO95257 159 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 TGM6O95932 706 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 MT-ND1P03886 318 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 NUP107P57740 925 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 H3F3AP84243 136 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 OR7A5Q15622 319 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 HIST2H2BCQ6DN03 193 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 PAQR6Q6TCH4 344 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 FCRLAQ7L513 359 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 C10orf53Q8N6V4 93 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 ASB5Q8WWX0 329 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 ACOT11Q8WXI4 607 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-220ENST00000588917 TAAR8Q969N4 342 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 UTP4Q969X6 686 aaKnown RBP17.51■□□□□ 0.39
CIRBP-220ENST00000588917 CHID1Q9BWS9 393 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 SRXN1Q9BYN0 137 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 TMCC3Q9ULS5 477 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 DNAJC13O75165 2243 aa17.51■□□□□ 0.39
CIRBP-220ENST00000588917 GTF3C1Q12789 2109 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 ESPL1Q14674 2120 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 VAMP5O95183 116 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 PLGP00747 810 aaPredicted RBP17.5■□□□□ 0.39
CIRBP-220ENST00000588917 NQO1P15559 274 aaKnown RBP17.5■□□□□ 0.39
CIRBP-220ENST00000588917 AGAP20933 346 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 GK3PQ14409 553 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 PDK3Q15120 406 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 XKRXQ6PP77 449 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 ZNF730Q6ZMV8 503 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 WDR88Q6ZMY6 472 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 LINC00471Q8N535 108 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 PAPD5Q8NDF8 572 aaKnown RBP17.5■□□□□ 0.39
CIRBP-220ENST00000588917 PIGXQ8TBF5 258 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 TMEM255BQ8WV15 326 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 ROBO4Q8WZ75 1007 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 SLC25A36Q96CQ1 311 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 CCDC120Q96HB5 630 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 GMPPAQ96IJ6 420 aaPredicted RBP17.5■□□□□ 0.39
CIRBP-220ENST00000588917 DHRS1Q96LJ7 313 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 PTDSS2Q9BVG9 487 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 ASPNQ9BXN1 380 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 KRCC1Q9NPI7 259 aaPredicted RBP17.5■□□□□ 0.39
CIRBP-220ENST00000588917 KLHL9Q9P2J3 617 aa17.5■□□□□ 0.39
CIRBP-220ENST00000588917 ZNF629Q9UEG4 869 aaPredicted RBP17.5■□□□□ 0.39
CIRBP-220ENST00000588917 SVILO95425 2214 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 FTCDNL1E5RQL4 147 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 CYTIPO60759 359 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 DIRAS1O95057 198 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 IL18BPO95998 194 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 HIST1H2ABP04908 130 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 CTSSP25774 331 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 OPRM1P35372 400 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 HMGA2P52926 109 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 SPIBQ01892 262 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 FOXD4Q12950 439 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-220ENST00000588917 TMEM225Q6GV28 225 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 SEM1Q6ZVN7 128 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 MBOAT2Q6ZWT7 520 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 H1FNTQ75WM6 255 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-220ENST00000588917 HIST3H2AQ7L7L0 130 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 MAMDC2Q7Z304 686 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-220ENST00000588917 RPRMLQ8N4K4 120 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 MARVELD2Q8N4S9 558 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 C9orf106Q8NAJ2 232 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 RNF128Q8TEB7 428 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 HIST1H2ACQ93077 130 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 DUS3LQ96G46 650 aaKnown RBP17.49■□□□□ 0.39
CIRBP-220ENST00000588917 NANSQ9NR45 359 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 MAN2C1Q9NTJ4 1040 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 C6orf203Q9P0P8 240 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-220ENST00000588917 B3GALT5Q9Y2C3 310 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 TESMINQ9Y4I5 508 aa17.49■□□□□ 0.39
CIRBP-220ENST00000588917 ZGRF1Q86YA3 2104 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 A0A087WUU8 490 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 GNGT2O14610 69 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 GPR171O14626 319 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 SMAD9O15198 467 aaKnown RBP17.48■□□□□ 0.39
CIRBP-220ENST00000588917 FZD7O75084 574 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 AQP8O94778 261 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 TOXO94900 526 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 CST1P01037 141 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 TMIGD3P0DMS9 266 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-220ENST00000588917 RRM2P31350 389 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 IFNGR2P38484 337 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 ACTR3P61158 418 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 RASGEF1BQ0VAM2 473 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 FGD3Q5JSP0 725 aa17.48■□□□□ 0.39
CIRBP-220ENST00000588917 OTUD3Q5T2D3 398 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-220ENST00000588917 OR2T5Q6IEZ7 315 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms