RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 KCNE5Q9UJ90 142 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 POMT2Q9UKY4 750 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 F5P12259 2224 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SCN3AQ9NY46 2000 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 IGF2RP11717 2491 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 COL4A2P08572 1712 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 A0A0X1KG70 313 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 A0A1B0GVI7 797 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 ZNF860A6NHJ4 632 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 HSPB2A8KAH6 182 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 SCAMP1O15126 338 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 ALX3O95076 343 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 IFNA16P05015 189 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 UCHL1P09936 223 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TYRP1P17643 537 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 STOMP27105 288 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 THBS2P35442 1172 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 ADH7P40394 386 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 GRK6P43250 576 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 GDI2P50395 445 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TPMTP51580 245 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 HSD17B7P56937 341 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 GNG2P59768 71 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 FAM53BQ14153 422 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 CDK5R1Q15078 307 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 HSPB2Q16082 182 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 NTRK2Q16620 822 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 FAM69AQ5T7M9 428 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 CD276Q5ZPR3 534 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 FAAH2Q6GMR7 532 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TAF8Q7Z7C8 310 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 MCATQ8IVS2 390 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 ZNF614Q8N883 585 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 CCL4L1Q8NHW4 92 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 DEDD2Q8WXF8 326 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TCTN2Q96GX1 697 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TIMP4Q99727 224 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 MARCH7Q9H992 704 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 UCK1Q9HA47 277 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 MCCC2Q9HCC0 563 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 ACOXLQ9NUZ1 547 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 SPATA2Q9UM82 520 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 CLCA3PQ9Y6N3 262 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TICRRQ7Z2Z1 1910 aa12.89□□□□□ -0.35
NEDD4L-223ENST00000588516 TRAV27A0A087WT01 109 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 A0A087WUJ7 227 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SLC9B1P1A6NJY1 282 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 NPIPB9F8W1W9 429 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 PRAF2O60831 178 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 RFPL3O75679 317 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 OR7A10O76100 309 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 CSTAP01040 98 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 C4BPBP20851 252 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 NOVA1P51513 510 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SLC25A1P53007 311 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 OR12D2P58182 307 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 PLA1AQ53H76 456 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 EMC4Q5J8M3 183 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 TCTE1Q5JU00 501 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 UBE2NLQ5JXB2 153 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 UNQ9370/PRO34162Q6UXP9 181 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 ZNF782Q6ZMW2 699 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SLC35F3Q8IY50 421 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 CADM2Q8N3J6 435 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 C19orf47Q8N9M1 422 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 ZCCHC14Q8WYQ9 949 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 PGLYRP3Q96LB9 341 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 VSTM2LQ96N03 204 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 DCLRE1CQ96SD1 692 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 GPX7Q96SL4 187 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SLC6A17Q9H1V8 727 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 C12orf10Q9HB07 376 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 FLRT3Q9NZU0 649 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 EPHA6Q9UF33 1036 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 ST6GALNAC2Q9UJ37 374 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 SIRT4Q9Y6E7 314 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 RNF215Q9Y6U7 377 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 MAU2Q9Y6X3 613 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 TRBV2A0A0J9YWF9 115 aa12.88□□□□□ -0.35
NEDD4L-223ENST00000588516 CENPVL1A0A0U1RR11 272 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms