RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SLCO1C1Q9NYB5 712 aa8.9□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF222Q9UK12 451 aa8.9□□□□□ -0.99
LINC01539-201ENST00000587904 ING1Q9UK53 422 aaPredicted RBP8.9□□□□□ -0.99
LINC01539-201ENST00000587904 C19orf53Q9UNZ5 99 aaPredicted RBP8.9□□□□□ -0.99
LINC01539-201ENST00000587904 MRPS33Q9Y291 106 aaKnown RBP8.9□□□□□ -0.99
LINC01539-201ENST00000587904 SIT1Q9Y3P8 196 aa8.9□□□□□ -0.99
LINC01539-201ENST00000587904 CACNA1IQ9P0X4 2223 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 MEIKINA0A087WXM9 373 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 A0A1W2PS29 197 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF860A6NHJ4 632 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 BCAT2O15382 392 aaPredicted RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 WBP4O75554 376 aaKnown RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 H1F0P07305 194 aaKnown RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SPP1P10451 314 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 FOLR2P14207 255 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 RAC2P15153 192 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SNRPNP63162 240 aaKnown RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SHC2P98077 582 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 DHODHQ02127 395 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF155Q12901 538 aaPredicted RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 FAM53BQ14153 422 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SEC23BQ15437 767 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SOWAHCQ53LP3 525 aaPredicted RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 DHRS7BQ6IAN0 325 aaPredicted RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 TCTN3Q6NUS6 607 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 FAM111BQ6SJ93 734 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 FAM198BQ6UWH4 519 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 PRSS41Q7RTY9 318 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 OR11H7Q8NGC8 314 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 KAT2AQ92830 837 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 C16orf58Q96GQ5 468 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 GFM1Q96RP9 751 aaKnown RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 ZPBPQ9BS86 351 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 RHNO1Q9BSD3 238 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 BARHL1Q9BZE3 327 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 CRLF2Q9HC73 371 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 FAM60AQ9NP50 221 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 PRUNE2Q8WUY3 3088 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 TEX13CA0A0J9YWL9 993 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 J3KTA2 159 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 AK1P00568 194 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 GP1BAP07359 652 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 APEHP13798 732 aaKnown RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 BCKDHBP21953 392 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SSTR2P30874 369 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 GGT2P36268 569 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 RAB5BP61020 215 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 DEFA5Q01523 94 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 EXOSC6Q5RKV6 272 aaKnown RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 FHL5Q5TD97 284 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 TCEAL6Q6IPX3 200 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 PLBD1Q6P4A8 553 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 NAXDQ8IW45 347 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 NANOGP1Q8N7R0 232 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 CDRT4Q8N9R6 151 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 OR52J3Q8NH60 311 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 COL26A1Q96A83 441 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 STACQ99469 402 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 KCNJ15Q99712 375 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 MAP3K3Q99759 626 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 WDR77Q9BQA1 342 aaPredicted RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 YIPF4Q9BSR8 244 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 GPR61Q9BZJ8 451 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 ACTR6Q9GZN1 396 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SLC38A1Q9H2H9 487 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 NMNAT1Q9HAN9 279 aaPredicted RBP8.89□□□□□ -0.99
LINC01539-201ENST00000587904 ENAMQ9NRM1 1142 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 DUSP22Q9NRW4 184 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 KLHL28Q9NXS3 571 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 SLC13A4Q9UKG4 626 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
LINC01539-201ENST00000587904 CEP192Q8TEP8 1941 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 TRIOO75962 3097 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 FFAR1O14842 300 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 NUDT21O43809 227 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 FGF17O60258 216 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 RDH16O75452 317 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 ATG12O94817 140 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 NSA2O95478 260 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 IFNA10P01566 189 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 SLC35E2P0CK97 266 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 SLC2A2P11168 524 aaPredicted RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 RNH1P13489 461 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 MUC1P15941 1255 aaPredicted RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 PTGFRP43088 359 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 RPS7P62081 194 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 GANABQ14697 944 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 SNAPC1Q16533 368 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 SMN1Q16637 294 aaKnown RBP8.88□□□□□ -0.99
LINC01539-201ENST00000587904 GUCA2BQ16661 112 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 DEFB133Q30KQ1 61 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 DEFB110Q30KQ9 67 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 ARHGAP11BQ3KRB8 267 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 DCST1Q5T197 706 aa8.88□□□□□ -0.99
LINC01539-201ENST00000587904 ZNF770Q6IQ21 691 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms