RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 GSTA3Q16772 222 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 SWI5Q1ZZU3 235 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 KRT71Q3SY84 523 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 IL17RELQ6ZVW7 336 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 SPATA19Q7Z5L4 167 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 VRK2Q86Y07 508 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 POMGNT2Q8NAT1 580 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
ERCC1-205ENST00000587888 TMEM45BQ96B21 275 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 PAIP2Q9BPZ3 127 aaKnown RBP12.36□□□□□ -0.43
ERCC1-205ENST00000587888 KCNS3Q9BQ31 491 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 KCNK9Q9NPC2 374 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 TMEM160Q9NX00 188 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 ADPRHL2Q9NX46 363 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
ERCC1-205ENST00000587888 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 LOC100289279A0A1B0GTE1 492 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 FAAHO00519 579 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 RGS16O15492 202 aaPredicted RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 LGI1O95970 557 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 PGRP06401 933 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 ALDOCP09972 364 aaKnown RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 RPS4Y1P22090 263 aaKnown RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 PDLIM4P50479 330 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 SRSF2Q01130 221 aaKnown RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 IQCCQ4KMZ1 466 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 ABHD12BQ7Z5M8 362 aaPredicted RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 PEX5LQ8IYB4 626 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 ANKS4BQ8N8V4 417 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 FOXN4Q96NZ1 517 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 SORCS2Q96PQ0 1159 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 TMEM109Q9BVC6 243 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 SF3B5Q9BWJ5 86 aaKnown RBP12.35□□□□□ -0.43
ERCC1-205ENST00000587888 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 CENPHQ9H3R5 247 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
ERCC1-205ENST00000587888 SLC35F4A4IF30 521 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 A8MVM7 634 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 NR5A2O00482 541 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 SNUPNO95149 360 aaKnown RBP12.34□□□□□ -0.43
ERCC1-205ENST00000587888 KRT75O95678 551 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 SERPINF1P36955 418 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 NR4A2P43354 598 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 GZMKP49863 264 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 SELENOPP49908 381 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 UBE2NP61088 152 aaKnown RBP12.34□□□□□ -0.43
ERCC1-205ENST00000587888 COPZ1P61923 177 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 SNRPD2P62316 118 aaKnown RBP12.34□□□□□ -0.43
ERCC1-205ENST00000587888 TUBA1BP68363 451 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 TUBA4AP68366 448 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 TBRG1Q3YBR2 411 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 WBP2NLQ6ICG8 309 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 NIPAL3Q6P499 406 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 CREB3L2Q70SY1 520 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 SLC46A3Q7Z3Q1 461 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 ZNF440Q8IYI8 595 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 OR52P1PQ8NH57 321 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 SLC38A2Q96QD8 506 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 AIG1Q9NVV5 245 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 FKBP7Q9Y680 259 aa12.34□□□□□ -0.43
ERCC1-205ENST00000587888 A0A096LPE4 126 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 A0A1W2PPZ6 126 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 VWC2LB2RUY7 222 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 ZNF587BE7ETH6 402 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 TM9SF1O15321 606 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 CRYAAP02489 173 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 PRG2P13727 222 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
ERCC1-205ENST00000587888 ETFAP13804 333 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 SRD5A1P18405 259 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.44
ERCC1-205ENST00000587888 CRATP43155 626 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 TXNL4AP83876 142 aaKnown RBP12.33□□□□□ -0.44
ERCC1-205ENST00000587888 MPP2Q14168 576 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 MAPK11Q15759 364 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 FAM120AOSQ5T036 256 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 C1QTNF12Q5T7M4 302 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 OGFOD2Q6N063 350 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 ANKRD16Q6P6B7 361 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 LRRC34Q8IZ02 419 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 KDM8Q8N371 416 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 CLIP4Q8N3C7 705 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 BCL2L2Q92843 193 aaPredicted RBP12.33□□□□□ -0.44
ERCC1-205ENST00000587888 SLC25A36Q96CQ1 311 aa12.33□□□□□ -0.44
ERCC1-205ENST00000587888 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
ERCC1-205ENST00000587888 PRR14Q9BWN1 585 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms