RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 IL12AP29459 219 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 STX3Q13277 289 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 OR7A5Q15622 319 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 GSTA3Q16772 222 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 HIKESHIQ53FT3 197 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 WDR93Q6P2C0 686 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 ZNF621Q6ZSS3 439 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 AAED1Q7RTV5 226 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 GPAT4Q86UL3 456 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 ZNF440Q8IYI8 595 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 POMGNT2Q8NAT1 580 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 BOD1Q96IK1 185 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 MOKQ9UQ07 419 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 CDHR4A6H8M9 788 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 SDHDO14521 159 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 USF1P22415 310 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-216ENST00000586813 CXCR1P25024 350 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 LRRC74AQ0VAA2 488 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 MAPK11Q15759 364 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 MST1LQ2TV78 715 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 CYB5R2Q6BCY4 276 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 MREGQ8N565 214 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 FBXO17Q96EF6 278 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 BEX2Q9BXY8 128 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 PIF1Q9H611 641 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 P2RX2Q9UBL9 471 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 LPAR3Q9UBY5 353 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 DSPPQ9NZW4 1301 aa16.9■□□□□ 0.3
TRAF4-216ENST00000586813 IGHV1-18A0A0C4DH31 117 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 KLF11O14901 512 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 KRT75O95678 551 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 F12P00748 615 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-216ENST00000586813 GKN3PP0CG01 181 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 BST1Q10588 318 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 MPP2Q14168 576 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 SWI5Q1ZZU3 235 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 LIN52Q52LA3 116 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 ZNF836Q6ZNA1 936 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 SPATA19Q7Z5L4 167 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 ABHD12BQ7Z5M8 362 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-216ENST00000586813 VRK2Q86Y07 508 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 CADM2Q8N3J6 435 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 AURKBQ96GD4 344 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-216ENST00000586813 OBP2BQ9NPH6 170 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 ADPRHL2Q9NX46 363 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 GPR45Q9Y5Y3 372 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 FKBP7Q9Y680 259 aa16.89■□□□□ 0.29
TRAF4-216ENST00000586813 VWC2LB2RUY7 222 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 RFXANKO14593 260 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 FRS3O43559 492 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 KRT33AO76009 404 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 ACAA2P42765 397 aaKnown RBP16.88■□□□□ 0.29
TRAF4-216ENST00000586813 P2RY4P51582 365 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 SNRPD2P62316 118 aaKnown RBP16.88■□□□□ 0.29
TRAF4-216ENST00000586813 LSM11P83369 360 aaKnown RBP eCLIP16.88■□□□□ 0.291e-7■■■□□ 18.3
TRAF4-216ENST00000586813 BNIP2Q12982 314 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 WBP2NLQ6ICG8 309 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 OR1K1Q8NGR3 316 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 OR52P1PQ8NH57 321 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 SORCS2Q96PQ0 1159 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 ALKBH3Q96Q83 286 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-216ENST00000586813 ZBTB18Q99592 522 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 TAPBPLQ9BX59 468 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 SLC6A13Q9NSD5 602 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 PRDM4Q9UKN5 801 aa16.88■□□□□ 0.29
TRAF4-216ENST00000586813 A8MVM7 634 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 ZNF587BE7ETH6 402 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 EPHA3P29320 983 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 SELENOPP49908 381 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 PDLIM4P50479 330 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 MVDP53602 400 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 COPZ1P61923 177 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 LGALS3BPQ08380 585 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 TBRG1Q3YBR2 411 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 RNF220Q5VTB9 566 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 TMEM225Q6GV28 225 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 GLB1L3Q8NCI6 653 aaPredicted RBP16.87■□□□□ 0.29
TRAF4-216ENST00000586813 SLC38A2Q96QD8 506 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 KATNB1Q9BVA0 655 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 SHARPINQ9H0F6 387 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 WDR55Q9H6Y2 383 aaPredicted RBP16.87■□□□□ 0.29
TRAF4-216ENST00000586813 CA10Q9NS85 328 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 TMEM45AQ9NWC5 275 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 CALML5Q9NZT1 146 aa16.87■□□□□ 0.29
TRAF4-216ENST00000586813 ZNF443Q9Y2A4 671 aaPredicted RBP16.87■□□□□ 0.29
TRAF4-216ENST00000586813 NDUFS8O00217 210 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 LMX1BO60663 402 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 VAMP5O95183 116 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 LGI1O95970 557 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 BCHEP06276 602 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 ETFAP13804 333 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 GZMKP49863 264 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 CRISP3P54108 245 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 GGTLC2Q14390 218 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 TNFAIP8L3Q5GJ75 292 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 C1orf140Q5VVS0 124 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 PRAMEF8Q5VWM4 474 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 PRAMEF7Q5VXH5 474 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 CREB3L2Q70SY1 520 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms