RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PDE5AO76074 875 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 VENTXO95231 258 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 CPSF4O95639 269 aaKnown RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 CREB1P16220 341 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 UQCRC2P22695 453 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 CFPP27918 469 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 SLC1A3P43003 542 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 HTR3AP46098 478 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 IDH3GP51553 393 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 EPS8Q12929 822 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 RIN1Q13671 783 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 CEACAM7Q14002 265 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 CASP8Q14790 479 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 TRIP10Q15642 601 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 SYPL1Q16563 259 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 MSMPQ1L6U9 139 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 ATAD3BQ5T9A4 648 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 VHLLQ6RSH7 139 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 EPHX4Q8IUS5 362 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 POMGNT2Q8NAT1 580 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 UBLCP1Q8WVY7 318 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 PMM1Q92871 262 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 DDIT4LQ96D03 193 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 ALKBH3Q96Q83 286 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 DOK1Q99704 481 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 NAA11Q9BSU3 229 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 SF3B5Q9BWJ5 86 aaKnown RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 AKTIPQ9H8T0 292 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 PPCSQ9HAB8 311 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 OBP2BQ9NPH6 170 aa10.3□□□□□ -0.76
BRCA1-225ENST00000586385 NOP53Q9NZM5 478 aaKnown RBP10.3□□□□□ -0.76
BRCA1-225ENST00000586385 A0A096LPE4 126 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 PRSS51A0A1B0GVH4 220 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 ITM2AO43736 263 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 AGR2O95994 175 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 DAOP14920 347 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 THBS4P35443 961 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 ACAA2P42765 397 aaKnown RBP10.29□□□□□ -0.76
BRCA1-225ENST00000586385 KHKP50053 298 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 CDH15P55291 814 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 BNIP2Q12982 314 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 OR7A5Q15622 319 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 GPAT3Q53EU6 434 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 SPANXN4Q5MJ08 99 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 MRPL2Q5T653 305 aaKnown RBP10.29□□□□□ -0.76
BRCA1-225ENST00000586385 KLHL24Q6TFL4 600 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 CREB3L2Q70SY1 520 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 RNF130Q86XS8 419 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 HOMEZQ8IX15 550 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 CMIPQ8IY22 773 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 SEMA6DQ8NFY4 1073 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 TCP10LQ8TDR4 215 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 PPP1R36Q96LQ0 422 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 TRNT1Q96Q11 434 aaKnown RBP10.29□□□□□ -0.76
BRCA1-225ENST00000586385 RLIMQ9NVW2 624 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 TMEM45AQ9NWC5 275 aa10.29□□□□□ -0.76
BRCA1-225ENST00000586385 MARCOQ9UEW3 520 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-225ENST00000586385 TMEFF2Q9UIK5 374 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-225ENST00000586385 CFAP73A6NFT4 308 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 TMEM229AB2RXF0 380 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 LYNX1G3V0Z9 82 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 hCG_2039718K7EN88 272 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 FRS3O43559 492 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 NPIPB7O75200 414 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 IGKV3-15P01624 115 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 CRYAAP02489 173 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 GPIP06744 558 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 LYNX1P0DP58 116 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 APEX1P27695 318 aaKnown RBP10.28□□□□□ -0.76
BRCA1-225ENST00000586385 SERPINB5P36952 375 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 CDKN2CP42773 168 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 ETV4P43268 484 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 PDCD2Q16342 344 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-225ENST00000586385 SMU1Q2TAY7 513 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 C3orf36Q3SXR2 165 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 COX20Q5RI15 118 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 GPAT4Q86UL3 456 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 CDK20Q8IZL9 346 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 ZNF786Q8N393 782 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 SVOPLQ8N434 492 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 FAM169BQ8N8A8 192 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 LINC01356Q8N9X3 169 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 ZNF540Q8NDQ6 660 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 NUP37Q8NFH4 326 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 MAGEE2Q8TD90 523 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-225ENST00000586385 HPS1Q92902 700 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 TESCQ96BS2 214 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 ZNF837Q96EG3 531 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-225ENST00000586385 TEX37Q96LM6 180 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 SNX18Q96RF0 628 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 SLC35A5Q9BS91 424 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 C20orf27Q9GZN8 174 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 PIF1Q9H611 641 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 ZNF442Q9H7R0 627 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 CHST2Q9Y4C5 530 aa10.28□□□□□ -0.76
BRCA1-225ENST00000586385 IGHV2OR16-5A0A0B4J2B6 119 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF587BE7ETH6 402 aa10.27□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF432O94892 652 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms