RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 RHCGQ9UBD6 479 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 CLCF1Q9UBD9 225 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 POMPQ9Y244 141 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 MED31Q9Y3C7 131 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 IGHV3-15A0A0B4J1V0 119 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 DHRS12A0PJE2 317 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 ZC3H12DA2A288 527 aaKnown RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MBD3L4A6NDZ8 208 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MBD3L3A6NE82 208 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MBD3L5A6NJ08 208 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 AQP12BA6NM10 295 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 H1F0P07305 194 aaKnown RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 BMP5P22003 454 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 CTSSP25774 331 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 RBM34P42696 430 aaKnown RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MS4A2Q01362 244 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 SPIBQ01892 262 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 RASGEF1BQ0VAM2 473 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 GPAT4Q86UL3 456 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 STK32CQ86UX6 486 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 AQP12AQ8IXF9 295 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 C10orf67Q8IYJ2 551 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 FAM86B1Q8N7N1 296 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 PIK3C3Q8NEB9 887 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MBD3L2Q8NHZ7 208 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF300Q96RE9 604 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 RSPO3Q9BXY4 272 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-215ENST00000584944 SLC19A3Q9BZV2 496 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 MAGIXQ9H6Y5 334 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 SLC7A8Q9UHI5 535 aa12.41□□□□□ -0.42
TRAF4-215ENST00000584944 LIPT2A6NK58 231 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 EEF1E1-BLOC1S5C9J1V9 151 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 EEF1E1O43324 174 aaKnown RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 SMNDC1O75940 238 aaKnown RBP eCLIP12.4□□□□□ -0.422e-7■■■□□ 15.6
TRAF4-215ENST00000584944 RCBTB2O95199 551 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 TGM6O95932 706 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 MT-ATP6P00846 226 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 CRHP06850 196 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 RAP2AP10114 183 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 SIRPAP78324 504 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 OTUD3Q5T2D3 398 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 PGM2L1Q6PCE3 622 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 NCCRP1Q6ZVX7 275 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 OFCC1Q8IZS5 231 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF808Q8N4W9 903 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 C9orf106Q8NAJ2 232 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM239Q8WW34 195 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 KTI12Q96EK9 354 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 GMPPAQ96IJ6 420 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 ADGRG7Q96K78 797 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 SRXN1Q9BYN0 137 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 NDEL1Q9GZM8 345 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 COQ10BQ9H8M1 238 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 NMNAT1Q9HAN9 279 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-215ENST00000584944 IL1RAPQ9NPH3 570 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 FANCFQ9NPI8 374 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 KCNJ16Q9NPI9 418 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 NDUFAF4Q9P032 175 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 RNF6Q9Y252 685 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 TESMINQ9Y4I5 508 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 CORINQ9Y5Q5 1042 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 HEATR5AQ86XA9 2040 aa12.4□□□□□ -0.42
TRAF4-215ENST00000584944 GTF3C1Q12789 2109 aa12.4□□□□□ -0.43
TRAF4-215ENST00000584944 APCP25054 2843 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 J3KTA2 159 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 GPR171O14626 319 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 ACOT8O14734 319 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 HNRNPRO43390 633 aaKnown RBP12.39□□□□□ -0.43
TRAF4-215ENST00000584944 AQP8O94778 261 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 DIRAS1O95057 198 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 AKR7A3O95154 331 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 GADD45GO95257 159 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 CH25HO95992 272 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 SAGP10523 405 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-215ENST00000584944 CBLP22681 906 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 IFNGR2P38484 337 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 ERFP50548 548 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 VLDLRP98155 873 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 SP5Q6BEB4 398 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-215ENST00000584944 PAQR6Q6TCH4 344 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 YTHDF3Q7Z739 585 aaKnown RBP12.39□□□□□ -0.43
TRAF4-215ENST00000584944 ADGRE4PQ86SQ3 457 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 MARVELD2Q8N4S9 558 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 ABHD3Q8WU67 409 aa12.39□□□□□ -0.43
TRAF4-215ENST00000584944 TAAR8Q969N4 342 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms