RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 OR13C2Q8NGS9 318 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 METTL9Q9H1A3 318 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 SLC22A11Q9NSA0 550 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 C20orf202A1L168 122 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 TMEM200CA6NKL6 621 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 H3BML4 177 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 PRICKLE3O43900 615 aaPredicted RBP12.16□□□□□ -0.46
RNF43-208ENST00000584437 PIPP12273 146 aaPredicted RBP12.16□□□□□ -0.46
RNF43-208ENST00000584437 IDUAP35475 653 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 RPS18P62269 152 aaKnown RBP12.16□□□□□ -0.46
RNF43-208ENST00000584437 ZNF74Q16587 644 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 BAK1Q16611 211 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 Q6ZSR9 355 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 NIPSNAP3BQ9BS92 247 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 WIF1Q9Y5W5 379 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 GPR75O95800 540 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 HOXC8P31273 242 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 KDM8Q8N371 416 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 FAM213BQ8TBF2 198 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 TMEM38AQ9H6F2 299 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
RNF43-208ENST00000584437 LRIT2A6NDA9 550 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 SULT2B1O00204 365 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 ADAM12O43184 909 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 SMAD6O43541 496 aaKnown RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 OR8G3PP0DMU2 310 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 SERPINA2P20848 420 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 NME2P22392 152 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 TACR1P25103 407 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 OR10K2Q6IF99 312 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 IGHG1P01857 330 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 ELAVL4P26378 380 aaKnown RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 ECI1P42126 302 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 ZNF266Q14584 549 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 MRPL2Q5T653 305 aaKnown RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 VASH1Q7L8A9 365 aaPredicted RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 TCEAL8Q8IYN2 117 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 CTRCQ99895 268 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 GPR174Q9BXC1 333 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 ASIC5Q9NY37 505 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 TAS2R16Q9NYV7 291 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 PAPLNO95428 1278 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 GIPP09681 153 aaPredicted RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 APLNRP35414 380 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 DCAF7P61962 342 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 EBPQ15125 230 aaKnown RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 TIGD3Q6B0B8 471 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 LIPIQ6XZB0 460 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 DEFB119Q8N690 84 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 RAB3CQ96E17 227 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 LRRC46Q96FV0 321 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 ALG12Q9BV10 488 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 TMEM59Q9BXS4 323 aa12.15□□□□□ -0.46
RNF43-208ENST00000584437 VSX1Q9NZR4 365 aaPredicted RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 GMPR2Q9P2T1 348 aaKnown RBP12.15□□□□□ -0.46
RNF43-208ENST00000584437 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 CEBPZOSA8MTT3 80 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 STMND1H3BQB6 276 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 TNFSF12O43508 249 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 GPX2P18283 190 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 HNRNPA2B1P22626 353 aaKnown RBP12.15□□□□□ -0.47
RNF43-208ENST00000584437 SFTPDP35247 375 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 PIGAP37287 484 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 HBG1P69891 147 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 HBG2P69892 147 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 CHRNEQ04844 493 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 DEFB110Q30KQ9 67 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.47
RNF43-208ENST00000584437 VASNQ6EMK4 673 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 C5orf46Q6UWT4 87 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 TMUB2Q71RG4 321 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 MDGA2Q7Z553 956 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 FUNDC1Q8IVP5 155 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 TMEM40Q8WWA1 233 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 LINC01599Q8WXQ3 324 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 NXF5Q9H1B4 397 aaKnown RBP12.15□□□□□ -0.47
RNF43-208ENST00000584437 KPTNQ9Y664 436 aa12.15□□□□□ -0.47
RNF43-208ENST00000584437 I6L893 689 aaPredicted RBP12.14□□□□□ -0.47
RNF43-208ENST00000584437 IQCF3P0C7M6 154 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 KITLGP21583 273 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 FPR3P25089 353 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 CTSCP53634 463 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 ISL1P61371 349 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 TEKQ02763 1124 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 HIST2H3AQ71DI3 136 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 YIPF5Q969M3 257 aa12.14□□□□□ -0.47
RNF43-208ENST00000584437 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms