RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 BMPERQ8N8U9 685 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PROKR2Q8NFJ6 384 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SNX33Q8WV41 574 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 UPRTQ96BW1 309 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM71F1Q96KD3 344 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C12orf66Q96MD2 445 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SNX18Q96RF0 628 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HDHD2Q9H0R4 259 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ISG20L2Q9H9L3 353 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PHPT1Q9NRX4 125 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CA14Q9ULX7 337 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MGAT4BQ9UQ53 548 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NCKAP1Q9Y2A7 1128 aa10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NCOR1O75376 2440 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 A0A087WUU8 490 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NDUFS4O43181 175 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SRP9P49458 86 aaKnown RBP10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 WNT4P56705 351 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SNRPGP62308 76 aaKnown RBP10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FUT5Q11128 374 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MLLT11Q13015 90 aaPredicted RBP10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 IDNKQ5T6J7 187 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 LCTLQ6UWM7 567 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ENPP7Q6UWV6 458 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SYT9Q86SS6 491 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 DCUN1D3Q8IWE4 304 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CD300LFQ8TDQ1 290 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FAM3CQ92520 227 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TSACCQ96A04 125 aaPredicted RBP10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CXorf40BQ96DE9 158 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NEURL3Q96EH8 262 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 DMRTA2Q96SC8 542 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 IFT27Q9BW83 186 aa10.71□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FAAHO00519 579 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MAGEB4O15481 346 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 HMGN2P05204 90 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 LIMS3P0CW19 117 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 LIMS4P0CW20 117 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SLC2A1P11166 492 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SSR2P43308 183 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TAS2R41P59536 307 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CSNK1G2P78368 415 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 C2orf76Q3KRA6 126 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 RNFT1Q5M7Z0 435 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 HSDL2Q6YN16 418 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OVCH2Q7RTZ1 564 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZNF479Q96JC4 524 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SLC35G5Q96KT7 338 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ALX4Q9H161 411 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR51V1Q9H2C8 321 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SPHK1Q9NYA1 384 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TRAPPC4Q9Y296 219 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TICRRQ7Z2Z1 1910 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 METTL21EPA6NDL7 271 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FAM170BA6NMN3 283 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NPIPA7E9PJI5 369 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SLC30A4O14863 429 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FCMRO60667 390 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZFPL1O95159 310 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 YES1P07947 543 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MRPL3P09001 348 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NPIPA8P0DM63 369 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 AK4P27144 223 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 AHRP35869 848 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MAP2K3P46734 347 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MTNR1AP48039 350 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PCBP4P57723 403 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ARF3P61204 181 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ARF1P84077 181 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZNF730Q6ZMV8 503 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 RRM2BQ7LG56 351 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 VASH2Q86V25 355 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PLCZ1Q86YW0 608 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FAM160A2Q8N612 972 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR4M2Q8NGB6 313 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR51G2Q8NGK0 314 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR5K2Q8NHB8 316 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SETD7Q8WTS6 366 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZNF607Q96SK3 696 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 DPEP2Q9H4A9 486 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 C2orf42Q9NWW7 574 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 GRIP1Q9Y3R0 1128 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ATG4BQ9Y4P1 393 aa10.7□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 AK1P00568 194 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 HCKP08631 526 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 BCL6P41182 706 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 RFX3P48380 749 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TRAM2Q15035 370 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 EIF2S3LQ2VIR3 472 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 XKRXQ6PP77 449 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ADAMTSL4Q6UY14 1074 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 POGLUT1Q8NBL1 392 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CCL4L1Q8NHW4 92 aa10.69□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NEIL3Q8TAT5 605 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms