RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 BRCA1P38398 1863 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 MYO18AQ92614 2054 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-208ENST00000583344 CROCCQ5TZA2 2017 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZFC3H1O60293 1989 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 A0A075B6Q4 140 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 A0A096LPI6 279 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 IGLV9-49A0A0B4J1Y8 123 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 OR51F1A6NGY5 319 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 METTL15A6NJ78 407 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 SUPT3HB4E1H0 165 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CDC7O00311 574 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 OR7A17O14581 309 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GNGT2O14610 69 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 DFNA5O60443 496 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PRAMEF11O60813 436 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 VPS26AO75436 327 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CRCPO75575 148 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 RHOBTB1O94844 696 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 OR4F21O95013 312 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ANGPTL1O95841 491 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PTTG1O95997 202 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 OTCP00480 354 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 SEMG1P04279 462 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF286BP0CG31 522 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 HAPLN1P10915 354 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ACP2P11117 423 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ODC1P11926 461 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ADRA2CP18825 462 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PTPN6P29350 595 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PRDX3P30048 256 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 HOXA9P31269 272 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TGFBR2P37173 567 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PTGER3P43115 390 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GNPDA1P46926 289 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TRPC1P48995 793 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TTPAP49638 278 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 KHKP50053 298 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 DAPP51397 102 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ARHGDIAP52565 204 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF140P52738 457 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CASP9P55211 416 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CLDN8P56748 225 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 HTD2P86397 168 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF33BQ06732 778 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ACSM1Q08AH1 577 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ABRQ12979 859 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 HSPB3Q12988 150 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 RAPSNQ13702 412 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 MAD2L1BPQ15013 274 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TAF1AQ15573 450 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TSNQ15631 228 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF404Q494X3 552 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 RFTN2Q52LD8 501 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 MS4A13Q5J8X5 152 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 THOC7Q6I9Y2 204 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TEX38Q6PEX7 206 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 AFTPHQ6ULP2 937 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GPRIN3Q6ZVF9 776 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PAGE2Q7Z2X7 111 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ABI3BPQ7Z7G0 1075 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TSPAN33Q86UF1 283 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC22A16Q86VW1 577 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CYP4Z1Q86W10 505 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TMEM173Q86WV6 379 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 MSRB3Q8IXL7 192 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GPALPP1Q8IXQ4 340 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GPC2Q8N158 579 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 THEM5Q8N1Q8 247 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 RYBPQ8N488 228 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 L3MBTL4Q8NA19 623 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 FNDC5Q8NAU1 212 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 KBTBD8Q8NFY9 601 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 MCOLN3Q8TDD5 553 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 EEF1AKMT1Q8WVE0 214 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 C17orf50Q8WW18 174 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 DNAJB3Q8WWF6 145 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ATL1Q8WXF7 558 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 DNASE1L2Q92874 299 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PSMG2Q969U7 264 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 MYLPFQ96A32 169 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZNF486Q96H40 463 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 DDOQ99489 341 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ZBTB18Q99592 522 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GPR21Q99679 349 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PITX2Q99697 317 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 APOL4Q9BPW4 351 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ABHD6Q9BV23 337 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 KATNB1Q9BVA0 655 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 POLR1EQ9GZS1 481 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 P2RY12Q9H244 342 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 FBXO44Q9H4M3 255 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CLMPQ9H6B4 373 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ACTR8Q9H981 624 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 NMUR1Q9HB89 426 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PDFQ9HBH1 243 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 RDH14Q9HBH5 336 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 IL1RAPQ9NPH3 570 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 FKBP14Q9NWM8 211 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 C1orf109Q9NX04 203 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC25A37Q9NYZ2 338 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms