RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SESN3	P58005	492 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	PRPS1	P60891	318 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	RAB8A	P61006	207 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	ABCE1	P61221	599 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	SARNP	P82979	210 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	DLG1	Q12959	904 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	THOC5	Q13769	683 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	RCN2	Q14257	317 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	GBX1	Q14549	363 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	PCGF3	Q3KNV8	242 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	HSP90AA5P	Q58FG0	334 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	COX20	Q5RI15	118 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	TSTD2	Q5T7W7	516 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	GRTP1	Q5TC63	336 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	ITPRIPL1	Q6GPH6	555 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	DESI1	Q6ICB0	168 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	PGM2L1	Q6PCE3	622 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	CRIP3	Q6Q6R5	217 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	LRRC74B	Q6ZQY2	392 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	WDR75	Q8IWA0	830 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	FAM169B	Q8N8A8	192 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	OR2M3	Q8NG83	312 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	OR4K1	Q8NGD4	311 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	RAB40A	Q8WXH6	277 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	FAM136A	Q96C01	138 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	RSRC1	Q96IZ7	334 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	MAEL	Q96JY0	434 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	FOPNL	Q96NB1	174 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	CPNE1	Q99829	537 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	MRPL37	Q9BZE1	423 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	IQCG	Q9H095	443 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	DCLRE1B	Q9H816	532 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	LRRC40	Q9H9A6	602 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	MOV10	Q9HCE1	1003 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	CHRAC1	Q9NRG0	131 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	IARS2	Q9NSE4	1012 aa	Known RBP	4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	KLHL9	Q9P2J3	617 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	SLC2A6	Q9UGQ3	507 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	DCDC2	Q9UHG0	476 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	SLC7A8	Q9UHI5	535 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	DAPP1	Q9UN19	280 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	LRCH1	Q9Y2L9	728 aa		4.02	□□□□□ -1.77
MSI2-216	ENST00000582772	DSPP	Q9NZW4	1301 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772		A0A096LPK6	155 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	IGHV1-69D	A0A0B4J2H0	117 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	KIR2DS1	A0A191URI9	304 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	TRBC2	A0A5B9	178 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	DPPA5	A6NC42	116 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	OR6C70	A6NIJ9	312 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	AQP7P3	A6NL99	342 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF724	A8MTY0	619 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	P2RY10	O00398	339 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	CDC14B	O60729	498 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	LDB3	O75112	727 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PSIP1	O75475	530 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SCAF4	O95104	1147 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	IL33	O95760	270 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	IGHV1-69	P01742	117 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	JUN	P05412	331 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	C2	P06681	752 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	CHRNG	P07510	517 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ACADS	P16219	412 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	TCN1	P20061	433 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	HIST1H1T	P22492	207 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	TYK2	P29597	1187 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	GALNS	P34059	522 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SPR	P35270	261 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ADRA1A	P35348	466 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	VHL	P40337	213 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	THBS3	P49746	956 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SERPINB8	P50452	374 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	LIM2	P55344	173 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	LINC00205	P59089	165 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	HERVK_113	P63132	956 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ERVK-8	P63133	956 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PLIN5	Q00G26	463 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	BTK	Q06187	659 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SLC34A1	Q06495	639 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	KLF10	Q13118	480 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	MPP3	Q13368	585 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	EFR3A	Q14156	821 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF460	Q14592	562 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	TRMT5	Q32P41	509 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	TMEM155	Q4W5P6	130 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ESCO2	Q56NI9	601 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	C9orf66	Q5T8R8	295 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ANKRD16	Q6P6B7	361 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	EPGN	Q6UW88	154 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ZYG11A	Q6WRX3	759 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	DGAT2L6	Q6ZPD8	337 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	IKBIP	Q70UQ0	350 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	FCRLA	Q7L513	359 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	NET1	Q7Z628	596 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ZC3HC1	Q86WB0	502 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PRR22	Q8IZ63	422 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	CENPL	Q8N0S6	344 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SPIC	Q8N5J4	248 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF781	Q8N8C0	355 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PPFIBP2	Q8ND30	876 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms