RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	DSCAM	O60469	2012 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708		A0A0G2JND7	137 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ZC3H12D	A2A288	527 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	LYZL6	O75951	148 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	AHSA1	O95433	338 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	C8B	P07358	591 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ADSL	P30566	484 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CEACAM7	Q14002	265 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MFSD13A	Q14CX5	517 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	PPA1	Q15181	289 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	OR7A5	Q15622	319 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	COQ5	Q5HYK3	327 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SWT1	Q5T5J6	900 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TMEM225	Q6GV28	225 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ULK3	Q6PHR2	472 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	DHDDS	Q86SQ9	333 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	POMGNT2	Q8NAT1	580 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TMEM171	Q8WVE6	324 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ZNF775	Q96BV0	537 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MUS81	Q96NY9	551 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CGREF1	Q99674	301 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SH3GL1	Q99961	368 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	AMBRA1	Q9C0C7	1298 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CXorf56	Q9H5V9	222 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ZNF701	Q9NV72	531 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TES	Q9UGI8	421 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SLC13A4	Q9UKG4	626 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MGAT4B	Q9UQ53	548 aa		11.11	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	LOC102725191	A0A1B0GVB3	256 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CIB4	A0PJX0	185 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	PDLIM1	O00151	329 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FRS3	O43559	492 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FMO6P	O60774	539 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	RAMP1	O60894	148 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	VIM	P08670	466 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	PCBP3	P57721	371 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	NCALD	P61601	193 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FOXD4	Q12950	439 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CYLC2	Q14093	348 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CAPRIN1	Q14444	709 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ELOA3B	Q3SY89	546 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	HSP90B2P	Q58FF3	399 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	KLHL17	Q6TDP4	642 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SEZ6L2	Q6UXD5	910 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TMEM108	Q6UXF1	575 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CASP12	Q6UXS9	341 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ARMC8	Q8IUR7	673 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	P3H2	Q8IVL5	708 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TMEM99	Q8N816	258 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ANKK1	Q8NFD2	765 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ELOA3	Q8NG57	546 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	OR9K2	Q8NGE7	335 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	OR52E4	Q8NGH9	312 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SLC47A1	Q96FL8	570 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	GRIP2	Q9C0E4	1043 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	IKZF5	Q9H5V7	419 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CCDC134	Q9H6E4	229 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	KAT8	Q9H7Z6	458 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MOV10	Q9HCE1	1003 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MED4	Q9NPJ6	270 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	DLL4	Q9NR61	685 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SELENON	Q9NZV5	590 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	UPB1	Q9UBR1	384 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	B3GALT5	Q9Y2C3	310 aa		11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	PRR14L	Q5THK1	2151 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CCT8L1P	A6NM43	557 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FAM171A2	A8MVW0	826 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FTCDNL1	E5RQL4	147 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MFN2	O95140	757 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	AKR7A3	O95154	331 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	EDNRA	P25101	427 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	PTAFR	P25105	342 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MPG	P29372	298 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	NTF4	P34130	210 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	P2RY4	P51582	365 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FAP	Q12884	760 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	NFYC	Q13952	458 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	MAPRE2	Q15555	327 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TSC22D1	Q15714	1073 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ETFDH	Q16134	617 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	GABRA6	Q16445	453 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CYP51A1	Q16850	503 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	TRMT5	Q32P41	509 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FAM69A	Q5T7M9	428 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	INTS11	Q5TA45	600 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	CREB3L2	Q70SY1	520 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	AAED1	Q7RTV5	226 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	PATL1	Q86TB9	770 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	RETREG3	Q86VR2	466 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	C10orf111	Q8N326	155 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ZIC4	Q8N9L1	334 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	ADPRHL1	Q8NDY3	354 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	RASSF5	Q8WWW0	418 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	SLC38A4	Q969I6	547 aa		11.09	□□□□□ -0.63
CDK5RAP3-222	ENST00000581708	FBXW5	Q969U6	566 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms