RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CCDC134Q9H6E4 229 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 KAT8Q9H7Z6 458 aaKnown RBP17.21■□□□□ 0.35
SREBF1-220ENST00000581707 C12orf10Q9HB07 376 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 MED4Q9NPJ6 270 aa17.21■□□□□ 0.35
SREBF1-220ENST00000581707 ACANP16112 2415 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 A0A1B0GWA3 101 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 CIB4A0PJX0 185 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 CCT8L1PA6NM43 557 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 AHSA1O95433 338 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 HTR2AP28223 471 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 PCBP3P57721 371 aaKnown RBP17.2■□□□□ 0.34
SREBF1-220ENST00000581707 ADAM8P78325 824 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 DMTNQ08495 405 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 FAPQ12884 760 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 CYLC2Q14093 348 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-220ENST00000581707 PPA1Q15181 289 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 TIMM23BQ5SRD1 257 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 NCMAPQ5T1S8 102 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 C6orf89Q6UWU4 347 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 NET1Q7Z628 596 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-220ENST00000581707 GPAT4Q86UL3 456 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 MFSD8Q8NHS3 518 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 DNAJA4Q8WW22 397 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-220ENST00000581707 CCL19Q99731 98 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 PIP5K1AQ99755 562 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 PIF1Q9H611 641 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 ESRP2Q9H6T0 727 aaKnown RBP17.2■□□□□ 0.34
SREBF1-220ENST00000581707 SAR1AQ9NR31 198 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 MALT1Q9UDY8 824 aa17.2■□□□□ 0.34
SREBF1-220ENST00000581707 FLNAP21333 2647 aaKnown RBP17.2■□□□□ 0.34
SREBF1-220ENST00000581707 CADP27708 2225 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 OR5H1A6NKK0 313 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 M0QX08 132 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SMPD2O60906 423 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 VAMP5O95183 116 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 PNMTP11086 282 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 CD99P14209 185 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 RPS5P46782 204 aaKnown RBP17.19■□□□□ 0.34
SREBF1-220ENST00000581707 P2RY4P51582 365 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 RGS8P57771 180 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-220ENST00000581707 NCALDP61601 193 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 EGR4Q05215 589 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 KLF10Q13118 480 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 TRMT5Q32P41 509 aaKnown RBP17.19■□□□□ 0.34
SREBF1-220ENST00000581707 ALG10BQ5I7T1 473 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 ULK3Q6PHR2 472 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SEZ6L2Q6UXD5 910 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SSX8Q7RTT4 187 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SLC30A8Q8IWU4 369 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 ZIC4Q8N9L1 334 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SMYD1Q8NB12 490 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 OR10A6Q8NH74 314 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 TMEM45BQ96B21 275 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SLC25A36Q96CQ1 311 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 KTI12Q96EK9 354 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-220ENST00000581707 TMUB1Q9BVT8 246 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 EVA1AQ9H8M9 152 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 TMEM27Q9HBJ8 222 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SLC7A10Q9NS82 523 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 TAS2R16Q9NYV7 291 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 SELENONQ9NZV5 590 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 UPB1Q9UBR1 384 aa17.19■□□□□ 0.34
SREBF1-220ENST00000581707 TESQ9UGI8 421 aaKnown RBP17.19■□□□□ 0.34
SREBF1-220ENST00000581707 HS3ST1O14792 307 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 RAD51DO75771 328 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 CD3EP07766 207 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 HOXC12P31275 282 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 MMEL1Q495T6 779 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 FAM91A1Q658Y4 838 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 NANOGP8Q6NSW7 305 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 AAED1Q7RTV5 226 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 AKAP1Q92667 903 aaKnown RBP eCLIP17.18■□□□□ 0.34
SREBF1-220ENST00000581707 SLC47A1Q96FL8 570 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 ZNF385AQ96PM9 386 aaKnown RBP17.18■□□□□ 0.34
SREBF1-220ENST00000581707 WFDC6Q9BQY6 131 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 PTDSS2Q9BVG9 487 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 NANOGQ9H9S0 305 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 RASD1Q9Y272 281 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 RNF115Q9Y4L5 304 aa17.18■□□□□ 0.34
SREBF1-220ENST00000581707 VPS13CQ709C8 3753 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 DPRXA6NFQ7 191 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 FTCDNL1E5RQL4 147 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 CLOCKO15516 846 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 OR2T1O43869 369 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 LGI1O95970 557 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 GTF2E2P29084 291 aaKnown RBP17.17■□□□□ 0.34
SREBF1-220ENST00000581707 PCGF2P35227 344 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
SREBF1-220ENST00000581707 FOXG1P55316 489 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-220ENST00000581707 NKX6-1P78426 367 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-220ENST00000581707 BSPH1Q075Z2 132 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 FOXD4Q12950 439 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-220ENST00000581707 MAPRE2Q15555 327 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 OR1Q1Q15612 314 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 DUSP7Q16829 419 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 COQ5Q5HYK3 327 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 TSPO2Q5TGU0 170 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 C5orf46Q6UWT4 87 aa17.17■□□□□ 0.34
SREBF1-220ENST00000581707 PATL1Q86TB9 770 aaKnown RBP17.17■□□□□ 0.34
SREBF1-220ENST00000581707 RANBP3LQ86VV4 465 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms