RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 VAMP5O95183 116 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 BGLAPP02818 100 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 ASAH2BP0C7U1 165 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 TFPIP10646 304 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 IMPDH2P12268 514 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 TCEA1P23193 301 aaKnown RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 ACVR2AP27037 513 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 OMPP47874 163 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 SLC9A3P48764 834 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 STARP49675 285 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 ARHGDIAP52565 204 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 CARD18P57730 90 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 RIPK1Q13546 671 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 PDK3Q15120 406 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 POU4F3Q15319 338 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 MICAQ29983 383 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 EIF2S3LQ2VIR3 472 aaKnown RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 ACSF3Q4G176 576 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 NSUN5P2Q63ZY6 315 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 ZNF770Q6IQ21 691 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 C1orf94Q6P1W5 598 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 PODNL1Q6PEZ8 512 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 SHQ1Q6PI26 577 aaKnown RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 CD163Q86VB7 1156 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 HIPK1Q86Z02 1210 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 CDK20Q8IZL9 346 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 PQLC1Q8N2U9 271 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 OR4K5Q8NGD3 323 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 TAAR8Q969N4 342 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 BPIFA2Q96DR5 249 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 KTI12Q96EK9 354 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 TAPBPLQ9BX59 468 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 TMEM185BQ9H7F4 350 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 RNF122Q9H9V4 155 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 NTN4Q9HB63 628 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 MRPL39Q9NYK5 338 aaKnown RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 RHCGQ9UBD6 479 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 MCTS1Q9ULC4 181 aaKnown RBP9.32□□□□□ -0.92
CCDC47-203ENST00000580986 CAMK2AQ9UQM7 478 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 GTF3C1Q12789 2109 aa9.32□□□□□ -0.92
CCDC47-203ENST00000580986 A0A1W2PNV4 684 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 MBD3L4A6NDZ8 208 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 MBD3L3A6NE82 208 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 MBD3L5A6NJ08 208 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 NPIPB13A6NJU9 1138 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 AQP7P3A6NL99 342 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 ENO4A6NNW6 628 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 NPIPB4C9JG80 1138 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 E9PLN8 166 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SEC14L5O43304 696 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 E2F6O75461 281 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 ADAP00813 363 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 CRHP06850 196 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 TPOP07202 933 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 FUT4P22083 530 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 FPR3P25089 353 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 TIMP3P35625 211 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 CA7P43166 264 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 RPS5P46782 204 aaKnown RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 EIF1AXP47813 144 aaKnown RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 ERFP50548 548 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SLC16A1P53985 500 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 CASP6P55212 293 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 NUP107P57740 925 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 RPS4XP62701 263 aaKnown RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 COX10Q12887 443 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SEC23BQ15437 767 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SGCBQ16585 318 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 EXOC3L2Q2M3D2 409 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 GTF2IRD2BQ6EKJ0 949 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 ABLIM2Q6H8Q1 611 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 CD300LDQ6UXZ3 194 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 CHMP1BQ7LBR1 199 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 MAMDC2Q7Z304 686 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SLC46A3Q7Z3Q1 461 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 GTF2IRD2Q86UP8 949 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 ATCAYQ86WG3 371 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 DOLPP1Q86YN1 238 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 ZDHHC13Q8IUH4 622 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 NRMQ8IXM6 262 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 UBQLNLQ8IYU4 475 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 OR5K1Q8NHB7 308 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 MBD3L2Q8NHZ7 208 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 PIGXQ8TBF5 258 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 RNF128Q8TEB7 428 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 LRTOMTQ8WZ04 291 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SMPDL3BQ92485 455 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 OSTF1Q92882 214 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SGTBQ96EQ0 304 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 TM9SF2Q99805 663 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 VKORC1Q9BQB6 163 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 TUBA1CQ9BQE3 449 aa9.31□□□□□ -0.92
CCDC47-203ENST00000580986 TACO1Q9BSH4 297 aaKnown RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 NAA11Q9BSU3 229 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-203ENST00000580986 SF3B5Q9BWJ5 86 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms