RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PARPBPQ9NWS1 579 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 NMRK1Q9NWW6 199 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 TXNDC16Q9P2K2 825 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 KLHL21Q9UJP4 597 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CMAHPQ9Y471 501 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 WIPI2Q9Y4P8 454 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 PPIAL4EA0A075B759 164 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ELOA3CA0A087WX78 387 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 PPIAL4CA0A0B4J2A2 164 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 PPIAL4DF5H284 164 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 TRAPPC2LH3BP13 241 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 GTPBP1O00178 669 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF264O43296 627 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 HOXA3O43365 443 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 DNPH1O43598 174 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 TRAF3IP2O43734 574 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 EIF4E2O60573 245 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SKAP2O75563 359 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CLPXO76031 633 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SEC14L2O76054 403 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 KLHL2O95198 593 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ANXA4P09525 319 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ALOX5P09917 674 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 PPIAL4FP0DN26 164 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 TFPIP10646 304 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 IMPDH2P12268 514 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 PAX7P23759 505 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 GNALP38405 381 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ANP32AP39687 249 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ATP4BP51164 291 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CCR4P51679 360 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF75DP51815 510 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 PROK1P58294 105 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 UBE2NP61088 152 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 POU6F2P78424 691 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 BTKQ06187 659 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ACSM2AQ08AH3 577 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF763Q0D2J5 394 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SKP2Q13309 424 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CBFBQ13951 182 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 FAM83EQ2M2I3 478 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SPIN4Q56A73 249 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 GRTP1Q5TC63 336 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 RUSC1-AS1Q66K80 236 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ACSM2BQ68CK6 577 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CDC73Q6P1J9 531 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF771Q7L3S4 317 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 AAED1Q7RTV5 226 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ADGRG3Q86Y34 549 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 COX18Q8N8Q8 333 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 POMGNT2Q8NAT1 580 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 NOA1Q8NC60 698 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SLC25A43Q8WUT9 341 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ST8SIA1Q92185 356 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CDKL2Q92772 493 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CIDECQ96AQ7 238 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ZHX1-C8orf76Q96EF9 292 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 MS4A4EQ96PG1 132 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ALKBH3Q96Q83 286 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CCDC106Q9BWC9 280 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 RASSF4Q9H2L5 321 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF385DQ9H6B1 395 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 LZTFL1Q9NQ48 299 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CTPS2Q9NRF8 586 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SERINC1Q9NRX5 453 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 ACER3Q9NUN7 267 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 SIRT5Q9NXA8 310 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 KCNE5Q9UJ90 142 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 DTNAQ9Y4J8 743 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 CACNG2Q9Y698 323 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 KCNE3Q9Y6H6 103 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 TANC2Q9HCD6 1990 aa6.51□□□□□ -1.37
SMARCE1-217ENST00000580654 TET2Q6N021 2002 aaPredicted RBP6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 IGHV3OR16-10A0A075B7F0 116 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 TMEM229AB2RXF0 380 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 CCDC188H7C350 402 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 PGRMC1O00264 195 aaKnown RBP6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 UPK3AO75631 287 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 URI1O94763 535 aaPredicted RBP6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 SEC31AO94979 1220 aaKnown RBP6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 HSPA4LO95757 839 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 OTCP00480 354 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 UBL4AP11441 157 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 CD33P20138 364 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 GSTM5P46439 218 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 ATP12AP54707 1039 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 OR2B6P58173 313 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 TNP2Q05952 138 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF154Q13106 437 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 ALKBH6Q3KRA9 238 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF385BQ569K4 471 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 OTUD3Q5T2D3 398 aaPredicted RBP6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 REP15Q6BDI9 236 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 ANKRD26P1Q6NSI1 321 aa6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 FIP1L1Q6UN15 594 aaKnown RBP6.5□□□□□ -1.37
SMARCE1-217ENST00000580654 SYT10Q6XYQ8 523 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms