RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CALUO43852 315 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RAMP3O60896 148 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 HUS1O60921 280 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ATP5LO75964 103 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NOL4O94818 638 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PMS2P2O95744 297 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 P04436 131 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 UMODP07911 640 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RPL35AP18077 110 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 XRCC1P18887 633 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ATP5A1P25705 553 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 GCAP28676 217 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OXTRP30559 389 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 CX3CR1P49238 355 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 MRPL19P49406 292 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ARRB1P49407 418 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 KCNJ2P63252 427 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OC90Q02509 493 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RBBP4Q09028 425 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RIPPLY1Q0D2K3 151 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ITPK1Q13572 414 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 CYTH1Q15438 398 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ZNF74Q16587 644 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PPP1R3AQ16821 1122 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C18orf21Q32NC0 220 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SLC25A52Q3SY17 297 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 DMRTC1Q5HYR2 192 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SPANXN4Q5MJ08 99 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ZNF324BQ6AW86 544 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C8orf74Q6P047 294 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PAQR6Q6TCH4 344 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SASS6Q6UVJ0 657 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ENPP6Q6UWR7 440 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 LRRC31Q6UY01 552 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C19orf35Q6ZS72 473 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 GPRIN3Q6ZVF9 776 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 FRA10AC1Q70Z53 315 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 CYS1Q717R9 158 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SLC16A14Q7RTX9 510 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TSEN54Q7Z6J9 526 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SFR1Q86XK3 245 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RNF130Q86XS8 419 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 DCUN1D3Q8IWE4 304 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 LRRC8AQ8IWT6 810 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 GPR65Q8IYL9 337 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 KIRREL3Q8IZU9 778 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 CMTM8Q8IZV2 173 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ARHGAP18Q8N392 663 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ARFGAP1Q8N6T3 406 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C15orf54Q8N8G6 183 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C8orf31Q8N9H6 132 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 KBTBD3Q8NAB2 608 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 B3GNT7Q8NFL0 401 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR4F17Q8NGA8 305 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR4F6Q8NGB9 312 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR4A15Q8NGL6 344 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR4F5Q8NH21 305 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PIH1D2Q8WWB5 315 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TAF15Q92804 592 aaKnown RBP eCLIP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TNFRSF14Q92956 283 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NAT6Q93015 286 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PLEKHA8Q96JA3 519 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ZNF385AQ96PM9 386 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ZNF317Q96PQ6 595 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR4F4Q96R69 305 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 CNN2Q99439 309 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NKX3-1Q99801 234 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SH3GL1Q99961 368 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C19orf43Q9BQ61 176 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RHNO1Q9BSD3 238 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 HINT2Q9BX68 163 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PRRG3Q9BZD7 231 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 FNDC4Q9H6D8 234 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NHEJ1Q9H9Q4 299 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 POPDC2Q9HBU9 364 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 ZC4H2Q9NQZ6 224 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NKIRAS1Q9NYS0 192 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 RALYQ9UKM9 306 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 CBY1Q9Y3M2 126 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 HS3ST3B1Q9Y662 390 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 C5P01031 1676 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 LAMB4A4D0S4 1761 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 PRUNE2Q8WUY3 3088 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 HTTP42858 3142 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TOGARAM1Q9Y4F4 1720 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NSD3Q9BZ95 1437 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 YTHDC2Q9H6S0 1430 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 EIF3AQ14152 1382 aaKnown RBP2.67□□□□□ -1.98
KPNB1-208ENST00000580019 ANKRD36BQ8N2N9 1353 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 IGLV5-45A0A087WSX0 123 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 IGLV5-52A0A0A0MRZ9 124 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 IGLV5-39A0A0G2JS06 123 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 IQCMA0A1B0GVH7 501 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 ZNF587BE7ETH6 402 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 E7EWF7 191 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 NEDD8-MDP1E9PL57 170 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 RAB29O14966 203 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 TM9SF1O15321 606 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 SIGLEC5O15389 551 aa2.67□□□□□ -1.98
KPNB1-208ENST00000580019 PPIHO43447 177 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms