RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ARHGDIAP52565 204 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 HMGA2P52926 109 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 SLC35A1P78382 337 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 IL1RL1Q01638 556 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 MRPL49Q13405 166 aaKnown RBP10.88□□□□□ -0.67
IFT20-207ENST00000578547 ZNF74Q16587 644 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 MICAQ29983 383 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 GXYLT1Q4G148 440 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 TMPPEQ6ZT21 453 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 RNF113BQ8IZP6 322 aaKnown RBP10.88□□□□□ -0.67
IFT20-207ENST00000578547 LRRC17Q8N6Y2 441 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 AQP11Q8NBQ7 271 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 GALNT11Q8NCW6 608 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 OR10G2Q8NGC3 310 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 OR5K1Q8NHB7 308 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 MFSD8Q8NHS3 518 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 GIPC3Q8TF64 312 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 ZHX1-C8orf76Q96EF9 292 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 TRIB1Q96RU8 372 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 ASPNQ9BXN1 380 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 PRRG4Q9BZD6 226 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 TIGARQ9NQ88 270 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 KIF17Q9P2E2 1029 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 SEC14L4Q9UDX3 406 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 TINAGQ9UJW2 476 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 OAZ3Q9UMX2 235 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 TMEM5Q9Y2B1 443 aa10.88□□□□□ -0.67
IFT20-207ENST00000578547 MAGED1Q9Y5V3 778 aaPredicted RBP10.88□□□□□ -0.67
IFT20-207ENST00000578547 TRGV8A0A0C4DH27 118 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 SLC22A20A6NK97 555 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 FIGNL2A6NMB9 653 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 EFCAB9A8MZ26 197 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 KDM4EB2RXH2 506 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 FTCDNL1E5RQL4 147 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 G3V2T6 193 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 M0R082 166 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 HIST1H2ABP04908 130 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 POU2F1P14859 743 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ENPP1P22413 925 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 PRKACGP22612 351 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 GRPRP30550 384 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 IFNGR2P38484 337 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 OMPP47874 163 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 CTBP2P56545 445 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 NUP107P57740 925 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 RAC3P60763 192 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 PRKCDQ05655 676 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 LTBQ06643 244 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 PON3Q15166 354 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ZNF239Q16600 458 aaKnown RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 ACSF3Q4G176 576 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 EMC4Q5J8M3 183 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 OTUD3Q5T2D3 398 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 PGBD2Q6P3X8 592 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 SHQ1Q6PI26 577 aaKnown RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 RPTNQ6XPR3 784 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 HIST3H2AQ7L7L0 130 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 MAMDC2Q7Z304 686 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 SLC46A3Q7Z3Q1 461 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 P4HA3Q7Z4N8 544 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 NANOGNBQ7Z5D8 188 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 STK32CQ86UX6 486 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 LINC00471Q8N535 108 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 OR13C2Q8NGS9 318 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ZNF417Q8TAU3 575 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 FNDC9Q8TBE3 224 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ROBO4Q8WZ75 1007 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 HIST1H2ACQ93077 130 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 GTPBP3Q969Y2 492 aaKnown RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 CPNE4Q96A23 557 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 SDCCAG3Q96C92 435 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 UCN2Q96RP3 112 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ZNF587Q96SQ5 575 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 DCLRE1BQ9H816 532 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 NANSQ9NR45 359 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 PAQR5Q9NXK6 330 aaPredicted RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 MCTS1Q9ULC4 181 aaKnown RBP10.87□□□□□ -0.67
IFT20-207ENST00000578547 OSGIN2Q9Y236 505 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 TRAPPC4Q9Y296 219 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ZNF835Q9Y2P0 537 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 ZGRF1Q86YA3 2104 aa10.87□□□□□ -0.67
IFT20-207ENST00000578547 MPDZO75970 2070 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 POLEQ07864 2286 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 TRAV27A0A087WT01 109 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 SMAD9O15198 467 aaKnown RBP10.86□□□□□ -0.67
IFT20-207ENST00000578547 WDR1O75083 606 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 MT-ATP6P00846 226 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 GABRA1P14867 456 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 GNLYP22749 145 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 ACVR2AP27037 513 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 UQCRFS1P47985 274 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 CASP6P55212 293 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 PMS2P3Q13401 168 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 GK3PQ14409 553 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 C1orf185Q5T7R7 199 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 ZNF770Q6IQ21 691 aaPredicted RBP10.86□□□□□ -0.67
IFT20-207ENST00000578547 ZER1Q7Z7L7 766 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 OAFQ86UD1 273 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 DOLPP1Q86YN1 238 aa10.86□□□□□ -0.67
IFT20-207ENST00000578547 HIPK1Q86Z02 1210 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms