RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 CARD16Q5EG05 197 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 DMRTC1Q5HYR2 192 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 GPR157Q5UAW9 335 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 OR4F3Q6IEY1 312 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 SCYL2Q6P3W7 929 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 CASC1Q6TDU7 716 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 RFLNAQ6ZTI6 216 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 COX15Q7KZN9 410 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PRSS41Q7RTY9 318 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 APTXQ7Z2E3 356 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 TRIM69Q86WT6 500 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF683Q8IZ20 524 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 MTURNQ8N3F0 131 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 ATP6V0D2Q8N8Y2 350 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 EIF1ADQ8N9N8 165 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 NKAPP1Q8N9T2 125 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 STXBP6Q8NFX7 210 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 OR52H1Q8NGJ2 320 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 OR52I1Q8NGK6 324 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 MYLPFQ96A32 169 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PINX1Q96BK5 328 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PGLYRP4Q96LB8 373 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 SENP8Q96LD8 212 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 TCEANC2Q96MN5 208 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 OMDQ99983 421 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 NRIP2Q9BQI9 281 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 NAT10Q9H0A0 1025 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 VCX2Q9H322 139 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 RNF167Q9H6Y7 350 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 POLE4Q9NR33 117 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 FARSBQ9NSD9 589 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 RBAKQ9NYW8 714 aaPredicted RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PIPOXQ9P0Z9 390 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 WARS2Q9UGM6 360 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 STAP1Q9ULZ2 295 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 RASD1Q9Y272 281 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 FRMPD3Q5JV73 1810 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 A0A096LNJ9 63 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 DCTN6O00399 190 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 PES1O00541 588 aaKnown RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 HSD17B6O14756 317 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 MBTPS2O43462 519 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 GMFGO60234 142 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 ZNF780AO75290 641 aaPredicted RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 IDH1O75874 414 aaKnown RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 MFN2O95140 757 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TBPP20226 339 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 HMGB2P26583 209 aaKnown RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 PBLDP30039 288 aaPredicted RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 RDXP35241 583 aaKnown RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 DDOSTP39656 456 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 GRIA1P42261 906 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 MAGEA8P43361 318 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 AP3M2P53677 418 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 SEC61GP60059 68 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 BDH1Q02338 343 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TGFBR3Q03167 851 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 RIPPLY1Q0D2K3 151 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 KLRB1Q12918 225 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 PPIL2Q13356 520 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 GK3PQ14409 553 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TRIM16LQ309B1 348 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 CEP55Q53EZ4 464 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 SFT2D3Q587I9 215 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 CFAP157Q5JU67 520 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 C1orf220Q5T0J3 134 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 ATAD3BQ5T9A4 648 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 PMF1Q6P1K2 205 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 C1orf94Q6P1W5 598 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 KDELC1Q6UW63 502 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 ACOT7LQ6ZUV0 252 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 ASCL5Q7RTU5 278 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 LRRC70Q7Z2Q7 622 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 C16orf62Q7Z3J2 963 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TPRA1Q86W33 373 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 SVOPLQ8N434 492 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 CLDN19Q8N6F1 224 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 C15orf54Q8N8G6 183 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 MFSD9Q8NBP5 474 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 NT5C3BQ969T7 300 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 CMTM7Q96FZ5 175 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 SDSLQ96GA7 329 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 RNF185Q96GF1 192 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 SLC41A3Q96GZ6 507 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TIMD4Q96H15 378 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 COQ2Q96H96 371 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 NPY6RQ99463 290 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 NIPSNAP3BQ9BS92 247 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TMEM43Q9BTV4 400 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 NEUROG2Q9H2A3 272 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 NARFLQ9H6Q4 476 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 YY1AP1Q9H869 796 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 UFSP2Q9NUQ7 469 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 AIPL1Q9NZN9 384 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 RNF14Q9UBS8 474 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 ZNF282Q9UDV7 671 aaPredicted RBP1.27□□□□□ -2.21
TOP2A-202ENST00000577541 BTNL2Q9UIR0 455 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 ADAM28Q9UKQ2 775 aa1.27□□□□□ -2.21
TOP2A-202ENST00000577541 TBX21Q9UL17 535 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms