RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 FGF11Q92914 225 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.83□□□□□ -2.12
COPS3-213ENST00000577210 CXorf40BQ96DE9 158 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 VSIG2Q96IQ7 327 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CELF6Q96J87 481 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 C12orf42Q96LP6 360 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 TECTBQ96PL2 329 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 MTMR9Q96QG7 549 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 IL4I1Q96RQ9 567 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CLCC1Q96S66 551 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PARD6BQ9BYG5 372 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CHIAQ9BZP6 476 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 NMUR2Q9GZQ4 415 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PPA2Q9H2U2 334 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 RHBGQ9H310 441 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 VCPKMTQ9H867 229 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ZDHHC11Q9H8X9 412 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CRLF2Q9HC73 371 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 SH2D2AQ9NP31 389 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 RPRD1BQ9NQG5 326 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 GLRX2Q9NS18 164 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CD274Q9NZQ7 290 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 BFARQ9NZS9 450 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 WRAP73Q9P2S5 460 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 BTNL2Q9UIR0 455 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PITPNC1Q9UKF7 332 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ERVW-1Q9UQF0 538 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 SCML2Q9UQR0 700 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CSDC2Q9Y534 153 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 IQANK1A0A1B0GTG1 560 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 TCRBV9S1A1TA0A576 114 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SMCO2A6NFE2 343 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 A8MXQ7 604 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 BOLA2-SMG1P6H3BVE0 249 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 WRBO00258 174 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 TAPBPO15533 448 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 TOM1O60784 492 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CDH16O75309 829 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ZNF254O75437 659 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 UPK3AO75631 287 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 GPX5O75715 221 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SNAPINO95295 136 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 OXSR1O95747 527 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 GNA14O95837 355 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CST1P01037 141 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 MMP1P03956 469 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 GAPDHP04406 335 aaKnown RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 HSPB1P04792 205 aaKnown RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 FGF4P08620 206 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 GIG44P09565 113 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 GZMAP12544 262 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ABOP16442 354 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 VDAC1P21796 283 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 FGF9P31371 208 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 IL2RGP31785 369 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CD80P33681 288 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 DRD3P35462 400 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 UGT1A5P35504 534 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 FDFT1P37268 417 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CCT6AP40227 531 aaKnown RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 EPS15P42566 896 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 BTDP43251 543 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 GYG1P46976 350 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 QARSP47897 775 aaKnown RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 DAP3P51398 398 aaKnown RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 DUSP3P51452 185 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 C21orf59P57076 290 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CDK16Q00536 496 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 KLRB1Q12918 225 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ZNF79Q15937 498 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 DUSP7Q16829 419 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 KLHL38Q2WGJ6 581 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 XKR7Q5GH72 579 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 OTPQ5XKR4 325 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 LRRC66Q68CR7 880 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 TMEM107Q6UX40 140 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 LRRC31Q6UY01 552 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 C17orf82Q86X59 251 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 ZNF677Q86XU0 584 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SKA3Q8IX90 412 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SVOPLQ8N434 492 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 C11orf42Q8N5U0 333 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CCDC71LQ8N9Z2 235 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 CATSPER1Q8NEC5 780 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 FAM83FQ8NEG4 500 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 SLC22A8Q8TCC7 542 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 MAGEE2Q8TD90 523 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 PEX13Q92968 403 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SLC25A38Q96DW6 304 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 C16orf74Q96GX8 76 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 IMMP1LQ96LU5 166 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 NOL4LQ96MY1 436 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 TSNARE1Q96NA8 513 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 PANX2Q96RD6 677 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 RNF2Q99496 336 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 ZNF184Q99676 751 aaPredicted RBP1.82□□□□□ -2.12
COPS3-213ENST00000577210 C11orf70Q9BRQ4 267 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SLC35A5Q9BS91 424 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 NIPSNAP3BQ9BS92 247 aa1.82□□□□□ -2.12
COPS3-213ENST00000577210 SRXN1Q9BYN0 137 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms