RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
TSEN54-204ENST00000577197 MRPL39Q9NYK5 338 aaKnown RBP11.25□□□□□ -0.61
TSEN54-204ENST00000577197 FBXL2Q9UKC9 423 aa11.25□□□□□ -0.61
TSEN54-204ENST00000577197 RNF6Q9Y252 685 aa11.25□□□□□ -0.61
TSEN54-204ENST00000577197 LOC102725191A0A1B0GVB3 256 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 IRGMA1A4Y4 181 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 A6NL46 340 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 MKRN2OSH3BPM6 223 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 KPNA4O00629 521 aaPredicted RBP11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ZIC3O60481 467 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 WBP4O75554 376 aaKnown RBP11.24□□□□□ -0.61
TSEN54-204ENST00000577197 CLIC3O95833 236 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 TXNDC12O95881 172 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 CH25HO95992 272 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 HIST1H2ABP04908 130 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 HPNP05981 417 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 SP1P08047 785 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 PIPP12273 146 aaPredicted RBP11.24□□□□□ -0.61
TSEN54-204ENST00000577197 POU1F1P28069 291 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 TNFSF10P50591 281 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 RAC1P63000 192 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ARMC4Q5T2S8 1044 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 GPR139Q6DWJ6 353 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 OR5M10Q6IEU7 315 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 HIST3H2AQ7L7L0 130 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 NANOGNBQ7Z5D8 188 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ZNF786Q8N393 782 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ZFP62Q8NB50 900 aaPredicted RBP11.24□□□□□ -0.61
TSEN54-204ENST00000577197 OR2M7Q8NG81 312 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 OR8D4Q8NGM9 314 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 OR13C2Q8NGS9 318 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 OR5J2Q8NH18 312 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 TMEM163Q8TC26 289 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 HIST1H2ACQ93077 130 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 RFKQ969G6 155 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ASPNQ9BXN1 380 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 DUSP21Q9H596 190 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 EGLN3Q9H6Z9 239 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 NRIP3Q9NQ35 241 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 CMC2Q9NRP2 79 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 CLN6Q9NWW5 311 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
TSEN54-204ENST00000577197 KLHL21Q9UJP4 597 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 TUBD1Q9UJT1 453 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 DKKL1Q9UK85 242 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 B3GALT5Q9Y2C3 310 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ANKRD11Q6UB99 2663 aaPredicted RBP11.24□□□□□ -0.61
TSEN54-204ENST00000577197 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 FREM2Q5SZK8 3169 aa11.24□□□□□ -0.61
TSEN54-204ENST00000577197 ACACBO00763 2458 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 A0A087WXM4 84 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 TRAV17A0A0B4J275 112 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 SLC1A7O00341 560 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 GNB5O14775 395 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 SURF4O15260 269 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 GLSO94925 669 aaPredicted RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 PMS2P2O95744 297 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 IFNGP01579 166 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 IGHMP01871 453 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 CD14P08571 375 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 RPSAP08865 295 aaKnown RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 HK1P19367 917 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 IDUAP35475 653 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 APOFQ13790 326 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 BLMHQ13867 455 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 ST3GAL2Q16842 350 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 CTU2Q2VPK5 515 aaKnown RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 FAM205BPQ63HN1 556 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 PTCHD4Q6ZW05 846 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 LRRC75AQ8NAA5 344 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 APH1BQ8WW43 257 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 EXTL1Q92935 676 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 TAAR8Q969N4 342 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 MIB2Q96AX9 1013 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 SAMD8Q96LT4 415 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 TAPBPLQ9BX59 468 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 ADNPQ9H2P0 1102 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 ZNF703Q9H7S9 590 aaPredicted RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 ACKR4Q9NPB9 350 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 MRPS18AQ9NVS2 196 aaKnown RBP11.23□□□□□ -0.61
TSEN54-204ENST00000577197 FKBP14Q9NWM8 211 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 ZNF226Q9NYT6 803 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 VDAC3Q9Y277 283 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 PCDHGB1Q9Y5G3 927 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 PTPRQQ9UMZ3 2332 aa11.23□□□□□ -0.61
TSEN54-204ENST00000577197 A0A1W2PNV4 684 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 EFCAB10A6NFE3 127 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 LIPT2A6NK58 231 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 C17orf51A8MQB3 221 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
TSEN54-204ENST00000577197 PRODHO43272 600 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 AHCYL1O43865 530 aa11.22□□□□□ -0.61
TSEN54-204ENST00000577197 EIF1BO60739 113 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms