RNA–Protein interactions for RNA: ENST00000575927.1

CYCSP40-201, Transcript of cytochrome c, somatic pseudogene 40, humanhuman

BASIC

Gene CYCSP40, Length 294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP40-201ENST00000575927 NANOGNBQ7Z5D8 188 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 PXKQ7Z7A4 578 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ATG4DQ86TL0 474 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 KMT5CQ86Y97 462 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 PLXDC1Q8IUK5 500 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 GPR135Q8IZ08 494 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 SPEM1Q8N4L4 309 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 LRRC17Q8N6Y2 441 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 SAMD12Q8N8I0 201 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 LSM14AQ8ND56 463 aaKnown RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NPEPL1Q8NDH3 523 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 C17orf47Q8NEP4 570 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NLGN4YQ8NFZ3 816 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 OR4M1Q8NGD0 313 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 OR1L3Q8NH93 324 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 OR14A16Q8NHC5 309 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 MOSPD2Q8NHP6 518 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 TRMT10AQ8TBZ6 339 aaKnown RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 HAVCR2Q8TDQ0 301 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ZNF721Q8TF20 911 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 PTPMT1Q8WUK0 201 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 SNX33Q8WV41 574 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 THAP4Q8WY91 577 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 PHYHIPQ92561 330 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 GHSRQ92847 366 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 DAZLQ92904 295 aaKnown RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 HIST1H2ACQ93077 130 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 TSLPQ969D9 159 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 RFT1Q96AA3 541 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 RASD2Q96D21 266 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 CLIP3Q96DZ5 547 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 SMIM19Q96E16 107 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 PELI1Q96FA3 418 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ZNF486Q96H40 463 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ZC3HAV1LQ96H79 300 aaKnown RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 SENP5Q96HI0 755 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 SHDQ96IW2 340 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 PGLYRP3Q96LB9 341 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 Q96M85 177 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 HSPA12BQ96MM6 686 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 FRMD6Q96NE9 622 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 GAL3ST4Q96RP7 486 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 LMF1Q96S06 567 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NMNAT3Q96T66 252 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NUDT9Q9BW91 350 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 TTTY10Q9BZA0 68 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NMNAT2Q9BZQ4 307 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 OR8D2Q9GZM6 311 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 LAT2Q9GZY6 243 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 HDHD2Q9H0R4 259 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 MMP28Q9H239 520 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 TTYH1Q9H313 450 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 LRRN3Q9H3W5 708 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NEK6Q9HC98 313 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 MMP25Q9NPA2 562 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 B3GAT2Q9NPZ5 323 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NRIP3Q9NQ35 241 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NANSQ9NR45 359 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 DDX28Q9NUL7 540 aaKnown RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 RBFOX1Q9NWB1 397 aaKnown RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ABRACLQ9P1F3 81 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NCDNQ9UBB6 729 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 COPS7AQ9UBW8 275 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 GNG8Q9UK08 70 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 FBXL4Q9UKA2 621 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 MOKQ9UQ07 419 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 RASD1Q9Y272 281 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 ADAM18Q9Y3Q7 739 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 TMEM184BQ9Y519 407 aaPredicted RBP4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 NPFFR2Q9Y5X5 522 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 CLCA3PQ9Y6N3 262 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 RALGAPA1Q6GYQ0 2036 aa4.46□□□□□ -1.7
CYCSP40-201ENST00000575927 KNL1Q8NG31 2342 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 A0A0G2JK05 382 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 TRBV2A0A0J9YWF9 115 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 FAM240BA0A1B0GVZ2 78 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 A0A1B0GX78 115 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 TCRBV16S1A1N1A0A5B0 115 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 OR6C68A6NDL8 312 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 OR6C76A6NM76 312 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 NOTOA8MTQ0 251 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 ZNF879B4DU55 563 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 H3BMH7 237 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 BLOC1S5-TXNDC5H3BN57 136 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 TO15178 435 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 NUDT21O43809 227 aaKnown RBP4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 ORC5O43913 435 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 CDC40O60508 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 SELENOFO60613 162 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 TSPAN2O60636 221 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 CPNE3O75131 537 aaKnown RBP4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 ICOSLGO75144 302 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 TRIM3O75382 744 aaPredicted RBP4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 SLC43A1O75387 559 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 ITGA10O75578 1167 aa4.45□□□□□ -1.7
CYCSP40-201ENST00000575927 SERPINI2O75830 405 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms