RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	IL32	P24001	234 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	CXCR1	P25024	350 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	P2RY4	P51582	365 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	NKX6-1	P78426	367 aa	Predicted RBP	12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	EGR4	Q05215	589 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	BNIP1	Q12981	228 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	SELPLG	Q14242	412 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	LARS2	Q15031	903 aa	Known RBP	12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	NCMAP	Q5T1S8	102 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	PRAMEF8	Q5VWM4	474 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	PRAMEF7	Q5VXH5	474 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	FBXW9	Q5XUX1	488 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	WBP2NL	Q6ICG8	309 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	OR52E4	Q8NGH9	312 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	BBS10	Q8TAM1	723 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	PIGX	Q8TBF5	258 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	HSD17B8	Q92506	261 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	POTEKP	Q9BYX7	375 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	FANCF	Q9NPI8	374 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507	FLVCR1	Q9Y5Y0	555 aa		12.5	□□□□□ -0.41
EDC4-210	ENST00000575507		B2RBV5	119 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	TMEM229A	B2RXF0	380 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	TPST2	O60704	377 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	ETS2	P15036	469 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	IDUA	P35475	653 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	MAP2K6	P52564	334 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	SLC35A1	P78382	337 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	CDK6	Q00534	326 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	CAPRIN1	Q14444	709 aa	Known RBP	12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	OR7A5	Q15622	319 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	GCNT6	Q5T4J0	391 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	NANOGP8	Q6NSW7	305 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	C8orf82	Q6P1X6	216 aa	Predicted RBP	12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	C16orf89	Q6UX73	402 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	PTOV1	Q86YD1	416 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	ZHX1-C8orf76	Q96EF9	292 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	ZNF385A	Q96PM9	386 aa	Known RBP	12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	PIP5K1A	Q99755	562 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	C1orf21	Q9H246	121 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	NANOG	Q9H9S0	305 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	SLC7A10	Q9NS82	523 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	NPAP1	Q9NZP6	1156 aa		12.49	□□□□□ -0.41
EDC4-210	ENST00000575507	AKAP6	Q13023	2319 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507		A0A1W2PR80	420 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	TMEM247	A6NEH6	219 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507		A8MVM7	634 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	PDLIM1	O00151	329 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	GPR171	O14626	319 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	EIF1B	O60739	113 aa	Known RBP	12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	MRPL33	O75394	65 aa	Known RBP	12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	ITGA5	P08648	1049 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	SLC6A2	P23975	617 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	HTR2A	P28223	471 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	RASSF2	P50749	326 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	NR1H2	P55055	460 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	MXRA7	P84157	204 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	FAP	Q12884	760 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	STK11	Q15831	433 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	TSPO2	Q5TGU0	170 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	REEP3	Q6NUK4	255 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	PAQR6	Q6TCH4	344 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	CCDC121	Q6ZUS5	278 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	PGAM4	Q8N0Y7	254 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	UBE2J2	Q8N2K1	259 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	AKAP1	Q92667	903 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	PIGT	Q969N2	578 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	APH1A	Q96BI3	265 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	CCL19	Q99731	98 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	SMR3A	Q99954	134 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	NAA11	Q9BSU3	229 aa	Predicted RBP	12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	PTDSS2	Q9BVG9	487 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	TMEM38A	Q9H6F2	299 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	SPAG4	Q9NPE6	437 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	EMC3	Q9P0I2	261 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	SEC14L4	Q9UDX3	406 aa		12.48	□□□□□ -0.41
EDC4-210	ENST00000575507	OR5H1	A6NKK0	313 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	AQP7P3	A6NL99	342 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	C5orf58	C9J3I9	102 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	FTCDNL1	E5RQL4	147 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	HS3ST1	O14792	307 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	SMPD2	O60906	423 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	RAD51D	O75771	328 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	CNOT4	O95628	575 aa	Known RBP	12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	GPI	P06744	558 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	UQCRB	P14927	111 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	GGT1	P19440	569 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	AQP1	P29972	269 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	PRKAR1B	P31321	381 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	PSME3	P61289	254 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	COPZ1	P61923	177 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	BSPH1	Q075Z2	132 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	DMTN	Q08495	405 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	SCARB2	Q14108	478 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	GABRA6	Q16445	453 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	ZSWIM7	Q19AV6	140 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	C9orf135	Q5VTT2	229 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	C1orf140	Q5VVS0	124 aa		12.47	□□□□□ -0.41
EDC4-210	ENST00000575507	DHRS4L2	Q6PKH6	230 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms