RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 GPIP06744 558 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 KITP10721 976 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 APOBEC3AP31941 199 aaPredicted RBP13.31□□□□□ -0.28
CTNS-209ENST00000574776 ACAA2P42765 397 aaKnown RBP13.31□□□□□ -0.28
CTNS-209ENST00000574776 CHRNB3Q05901 458 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 LOXL1Q08397 574 aaPredicted RBP13.31□□□□□ -0.28
CTNS-209ENST00000574776 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 ELOA3BQ3SY89 546 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 CHRFAM7AQ494W8 412 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 HIKESHIQ53FT3 197 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 TMEM225Q6GV28 225 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 ZNF836Q6ZNA1 936 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 GPAT4Q86UL3 456 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 ZNF440Q8IYI8 595 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 ANKRD42Q8N9B4 389 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 ELOA3Q8NG57 546 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 NANOS1Q8WY41 292 aaKnown RBP13.31□□□□□ -0.28
CTNS-209ENST00000574776 FAM168AQ92567 244 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 TMEM45BQ96B21 275 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 REPIN1Q9BWE0 567 aaKnown RBP13.31□□□□□ -0.28
CTNS-209ENST00000574776 SF3B5Q9BWJ5 86 aaKnown RBP13.31□□□□□ -0.28
CTNS-209ENST00000574776 MOKQ9UQ07 419 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 PMF1-BGLAPU3KQ54 211 aa13.31□□□□□ -0.28
CTNS-209ENST00000574776 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 ATP6V1G2-DDX39BF2Z307 99 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 HDAC3O15379 428 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 SLC22A3O75751 556 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 KRT33AO76009 404 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 LY6HO94772 140 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 WNT11O96014 354 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 BMP4P12644 408 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 ETFAP13804 333 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 CRATP43155 626 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 EFNA4P52798 201 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 MVDP53602 400 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 WDR4P57081 412 aaKnown RBP13.3□□□□□ -0.28
CTNS-209ENST00000574776 COPZ1P61923 177 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 C6orf52Q5T4I8 152 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 NXNQ6DKJ4 435 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 WBP2NLQ6ICG8 309 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 CLIP4Q8N3C7 705 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 POMGNT2Q8NAT1 580 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 GLB1L3Q8NCI6 653 aaPredicted RBP13.3□□□□□ -0.28
CTNS-209ENST00000574776 FBXO17Q96EF6 278 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 KCNK17Q96T54 332 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 THAP1Q9NVV9 213 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 ADPRHL2Q9NX46 363 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 CUBNO60494 3623 aa13.3□□□□□ -0.28
CTNS-209ENST00000574776 TRPC5OSA6NMA1 111 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 A8MVM7 634 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
CTNS-209ENST00000574776 IL6P05231 212 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 BCHEP06276 602 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 PRG2P13727 222 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 SLC25A16P16260 332 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 VLDLRP98155 873 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 LGALS3BPQ08380 585 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 LIN52Q52LA3 116 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 KLHL24Q6TFL4 600 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 C10orf105Q8TEF2 133 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 SLC38A5Q8WUX1 472 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 TAPBPLQ9BX59 468 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 TMEM45AQ9NWC5 275 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 ZNF232Q9UNY5 417 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 ARFGEF3Q5TH69 2177 aa13.29□□□□□ -0.28
CTNS-209ENST00000574776 SNNO75324 88 aaPredicted RBP13.28□□□□□ -0.28
CTNS-209ENST00000574776 ANP32DO95626 131 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 LGI1O95970 557 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 IDO1P14902 403 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 NCF2P19878 526 aaPredicted RBP13.28□□□□□ -0.28
CTNS-209ENST00000574776 SELENOPP49908 381 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 P2RY4P51582 365 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 CRISP3P54108 245 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 DSTNP60981 165 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 LARS2Q15031 903 aaKnown RBP13.28□□□□□ -0.28
CTNS-209ENST00000574776 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 GTDC1Q4AE62 458 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
CTNS-209ENST00000574776 RPS26P11Q5JNZ5 115 aaPredicted RBP13.28□□□□□ -0.28
CTNS-209ENST00000574776 C1QTNF12Q5T7M4 302 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 C1orf140Q5VVS0 124 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 CYB5R2Q6BCY4 276 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 CREB3L2Q70SY1 520 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 MGARPQ8TDB4 240 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 PROX1Q92786 737 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 PIF1Q9H611 641 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 TPT1P8Q9HAU6 139 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 CALML5Q9NZT1 146 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 PRDM4Q9UKN5 801 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 ZNF443Q9Y2A4 671 aaPredicted RBP13.28□□□□□ -0.28
CTNS-209ENST00000574776 CHST2Q9Y4C5 530 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
CTNS-209ENST00000574776 IGHV1-18A0A0C4DH31 117 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 NR5A2O00482 541 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 VAMP5O95183 116 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 USF1P22415 310 aaPredicted RBP13.27□□□□□ -0.29
CTNS-209ENST00000574776 TBRG1Q3YBR2 411 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms