RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 LAT2Q9GZY6 243 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 QRSL1Q9H0R6 528 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 PIF1Q9H611 641 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 SERINC1Q9NRX5 453 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 KLHL9Q9P2J3 617 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 KLHL13Q9P2N7 655 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 RPS6KA6Q9UK32 745 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 BAG5Q9UL15 447 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 SLC35A3Q9Y2D2 325 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 ORC6Q9Y5N6 252 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 SPIN1Q9Y657 262 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 V9GYQ6 96 aa8.61□□□□□ -1.03
NPLOC4-216ENST00000574344 TRBV5-3A0A0A0MS03 114 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 TCRBV5S2A0A599 114 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 GNGT2O14610 69 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 EFNA2O43921 213 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 TFPIP10646 304 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 ZNF23P17027 643 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 ENPP1P22413 925 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 NR1H2P55055 460 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 PHC1P78364 1004 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 RASGEF1BQ0VAM2 473 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SELPLGQ14242 412 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 ACKR1Q16570 336 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 Q5PR19 223 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SHEQ5VZ18 495 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SAXO2Q658L1 398 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 TYW3Q6IPR3 259 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 HEPHL1Q6MZM0 1159 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 TFAP2EQ6VUC0 442 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 FRRS1Q6ZNA5 592 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 C20orf204Q6ZNR8 217 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 NUFIP2Q7Z417 695 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 RNF130Q86XS8 419 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 ZNF619Q8N2I2 560 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SLC43A2Q8N370 569 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SVOPLQ8N434 492 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 PAPD5Q8NDF8 572 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 STEAP2Q8NFT2 490 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 PNPT1Q8TCS8 783 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SLCO4A1Q96BD0 722 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 NEURL3Q96EH8 262 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 DNAJA3Q96EY1 480 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 PERPQ96FX8 193 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 CNBD2Q96M20 576 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SEPHS2Q99611 448 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 KAT8Q9H7Z6 458 aaKnown RBP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SLC25A37Q9NYZ2 338 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 SLAMF8Q9P0V8 285 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 KCNE5Q9UJ90 142 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 PCDHB14Q9Y5E9 798 aa8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 NIPBLQ6KC79 2804 aaeCLIP8.6□□□□□ -1.03
NPLOC4-216ENST00000574344 ROS1P08922 2347 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SULT2B1O00204 365 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 CLIC1O00299 241 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 CLOCKO15516 846 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SCN2BO60939 215 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 H6PDO95479 791 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 NTN1O95631 604 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 HPRP00739 348 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 GSNP06396 782 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 THBDP07204 575 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 FESP07332 822 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 YES1P07947 543 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZCCHC18P0CG32 403 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 PSMB1P20618 241 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SH3BGRP55822 239 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 RAC3P60763 192 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 CSNK2A1P68400 391 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 FUT5Q11128 374 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 TSC22D1Q15714 1073 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 MAPK14Q16539 360 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 NRF1Q16656 503 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 LRRC23Q53EV4 343 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SYT14P1Q58G82 188 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SLC25A53Q5H9E4 307 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 HMBOX1Q6NT76 420 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZNF704Q6ZNC4 412 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZNF621Q6ZSS3 439 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 C22orf34Q6ZV56 151 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 PLEKHM3Q6ZWE6 761 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 AMIGO2Q86SJ2 522 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SLC30A8Q8IWU4 369 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 SLC25A43Q8WUT9 341 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 KISS1RQ969F8 398 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 S100PBPQ96BU1 408 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZNF775Q96BV0 537 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZHX1-C8orf76Q96EF9 292 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ZNF583Q96ND8 569 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 PSD2Q9BQI7 771 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 CHID1Q9BWS9 393 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 FAM192AQ9GZU8 254 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 GP6Q9HCN6 339 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 CTPS2Q9NRF8 586 aa8.59□□□□□ -1.03
NPLOC4-216ENST00000574344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms