RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ZIC4Q8N9L1 334 aa22.93■■□□□ 1.26
NPLOC4-215ENST00000574095 OR9K2Q8NGE7 335 aa22.93■■□□□ 1.26
NPLOC4-215ENST00000574095 ZNF385AQ96PM9 386 aaKnown RBP22.93■■□□□ 1.26
NPLOC4-215ENST00000574095 RABEP2Q9H5N1 569 aa22.93■■□□□ 1.26
NPLOC4-215ENST00000574095 GMEB1Q9Y692 573 aa22.93■■□□□ 1.26
NPLOC4-215ENST00000574095 USF3Q68DE3 2245 aa22.93■■□□□ 1.26
NPLOC4-215ENST00000574095 EVPLLA8MZ36 301 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 TMEM229AB2RXF0 380 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 TPST1O60507 370 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 GPX2P18283 190 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 PRKAR1BP31321 381 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 GABRA6Q16445 453 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 TMEM225Q6GV28 225 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 BIVMQ86UB2 503 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 COMTD1Q86VU5 262 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 CIARTQ8N365 385 aaPredicted RBP22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 SLC35B4Q969S0 331 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 MUS81Q96NY9 551 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 SF3B5Q9BWJ5 86 aaKnown RBP22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 NPHS2Q9NP85 383 aa22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 ZNF701Q9NV72 531 aaPredicted RBP22.92■■□□□ 1.26
NPLOC4-215ENST00000574095 H7C1Q1 480 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 PDLIM1O00151 329 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 EDF1O60869 148 aaKnown RBP22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 NPIPB7O75200 414 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 SOD3P08294 240 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 DANCRP0C864 163 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 PAX1P15863 534 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 P2RY4P51582 365 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 SCARB2Q14108 478 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 GLIPR1L2Q4G1C9 344 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 RUNDC3AQ59EK9 446 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 Q71RC1 249 aaPredicted RBP22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 AAED1Q7RTV5 226 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 STK35Q8TDR2 534 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 SMAP2Q8WU79 429 aaPredicted RBP22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 STON2Q8WXE9 905 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 TMEM45BQ96B21 275 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 CPPED1Q9BRF8 314 aaPredicted RBP22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 PRR14Q9BWN1 585 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 TRIM2Q9C040 744 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 ZNF385DQ9H6B1 395 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 RPS6KB2Q9UBS0 482 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 LEF1Q9UJU2 399 aaPredicted RBP22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 CORO2BQ9UQ03 480 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 NDUFAF1Q9Y375 327 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 SLC25A15Q9Y619 301 aa22.91■■□□□ 1.26
NPLOC4-215ENST00000574095 TRIM64A6NGJ6 449 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 TRIM64BA6NI03 449 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 ABCD4O14678 606 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 AHSA1O95433 338 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 SLC6A2P23975 617 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 RPS4XP62701 263 aaKnown RBP22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 EGR4Q05215 589 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 ADRM1Q16186 407 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 OR7E24Q6IFN5 339 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 DHRS4L2Q6PKH6 230 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 SSX8Q7RTT4 187 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 KRT73Q86Y46 540 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 SLC25A36Q96CQ1 311 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 SPATA5L1Q9BVQ7 753 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 TMEM38AQ9H6F2 299 aa22.9■■□□□ 1.26
NPLOC4-215ENST00000574095 A0A0G2JND7 137 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 ELOA3DA6NLF2 546 aaPredicted RBP22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 SHISA9B4DS77 424 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 TMCC2O75069 709 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 HTR2AP28223 471 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 AQP1P29972 269 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 RPS5P46782 204 aaKnown RBP22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 ZNF83P51522 516 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 ATP5J2P56134 94 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 ELOA3BQ3SY89 546 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 ELOA3Q8NG57 546 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 C1QTNF6Q9BXI9 259 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 CISD1Q9NZ45 108 aaKnown RBP22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 TRIM33Q9UPN9 1127 aa22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 MAGED1Q9Y5V3 778 aaPredicted RBP22.89■■□□□ 1.25
NPLOC4-215ENST00000574095 FTCDNL1E5RQL4 147 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 PGGHGQ32M88 737 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 CREB3L2Q70SY1 520 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 DHDDSQ86SQ9 333 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 RETREG3Q86VR2 466 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 PIAS4Q8N2W9 510 aaPredicted RBP22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 WDR31Q8NA23 367 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 MFSD8Q8NHS3 518 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 KTI12Q96EK9 354 aaPredicted RBP22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 COX4I2Q96KJ9 171 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 BDH2Q9BUT1 245 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 PTDSS2Q9BVG9 487 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 SLCO5A1Q9H2Y9 848 aa22.88■■□□□ 1.25
NPLOC4-215ENST00000574095 NIPBLQ6KC79 2804 aaeCLIP22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 A0A1B0GWA3 101 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 SMAD7O15105 426 aaKnown RBP22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 ANGPT2O15123 496 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 VAMP5O95183 116 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 SELPLGQ14242 412 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 TMEM108Q6UXF1 575 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 CLEC9AQ6UXN8 241 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 KDM8Q8N371 416 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 LSMEM1Q8N8F7 131 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms