RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 BNIP2Q12982 314 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 DHDDSQ86SQ9 333 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 ZNF100Q8IYN0 542 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 BHLHE22Q8NFJ8 381 aaPredicted RBP15.24■□□□□ 0.03
SMG6-212ENST00000573153 KBTBD8Q8NFY9 601 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 OR52E4Q8NGH9 312 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 STK35Q8TDR2 534 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 AKAP1Q92667 903 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMG6-212ENST00000573153 CGREF1Q99674 301 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 SF3B5Q9BWJ5 86 aaKnown RBP15.24■□□□□ 0.03
SMG6-212ENST00000573153 EVA1AQ9H8M9 152 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.24■□□□□ 0.03
SMG6-212ENST00000573153 NOSIPQ9Y314 301 aaKnown RBP15.24■□□□□ 0.03
SMG6-212ENST00000573153 PRORSD1PA6NEY8 169 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 OR5H1A6NKK0 313 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 AQP7P3A6NL99 342 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 ANGPT2O15123 496 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 TPST1O60507 370 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 SLC6A2P23975 617 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 PCBP3P57721 371 aaKnown RBP15.23■□□□□ 0.03
SMG6-212ENST00000573153 SLC25A3Q00325 362 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 RBBP4Q09028 425 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 SCARB2Q14108 478 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 PGGHGQ32M88 737 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 GLIPR1L2Q4G1C9 344 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 TIMM23BQ5SRD1 257 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 NET1Q7Z628 596 aaPredicted RBP15.23■□□□□ 0.03
SMG6-212ENST00000573153 P2RY8Q86VZ1 359 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 PTOV1Q86YD1 416 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 CADM2Q8N3J6 435 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 TMEM99Q8N816 258 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 HIPK4Q8NE63 616 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 TMEM45BQ96B21 275 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 APH1AQ96BI3 265 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 PERPQ96FX8 193 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 C18orf12Q96KH6 178 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 ZNF385AQ96PM9 386 aaKnown RBP15.23■□□□□ 0.03
SMG6-212ENST00000573153 ZNF607Q96SK3 696 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 TMEM120AQ9BXJ8 343 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 TRIM2Q9C040 744 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 SLC7A10Q9NS82 523 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 SLC9A8Q9Y2E8 581 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 RNF115Q9Y4L5 304 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 SLC25A15Q9Y619 301 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 DNHD1Q96M86 4753 aa15.23■□□□□ 0.03
SMG6-212ENST00000573153 NSD1Q96L73 2696 aaPredicted RBP15.22■□□□□ 0.03
SMG6-212ENST00000573153 ZANQ9Y493 2812 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 IGKV1D-42A0A075B6H8 117 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 TPST2O60704 377 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 TMCC2O75069 709 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 TROVE2P10155 538 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMG6-212ENST00000573153 CEACAM7Q14002 265 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 GABRA6Q16445 453 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 COQ5Q5HYK3 327 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 TSPO2Q5TGU0 170 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 C1orf140Q5VVS0 124 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 CGB2Q6NT52 195 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 WDR31Q8NA23 367 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 MUS81Q96NY9 551 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 KAT8Q9H7Z6 458 aaKnown RBP15.22■□□□□ 0.03
SMG6-212ENST00000573153 NGBQ9NPG2 151 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 PARPBPQ9NWS1 579 aa15.22■□□□□ 0.03
SMG6-212ENST00000573153 FN1P02751 2386 aaKnown RBP15.22■□□□□ 0.03
SMG6-212ENST00000573153 NAV3Q8IVL0 2385 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 MRPL33O75394 65 aaKnown RBP15.21■□□□□ 0.03
SMG6-212ENST00000573153 SERPINB7O75635 380 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 RAD51DO75771 328 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 AKR7A3O95154 331 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 VAMP5O95183 116 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 CD8AP01732 235 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 GGT1P19440 569 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 SPOCK1Q08629 439 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 SELPLGQ14242 412 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 PPA1Q15181 289 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 ZNF672Q499Z4 452 aaPredicted RBP15.21■□□□□ 0.03
SMG6-212ENST00000573153 OTUD3Q5T2D3 398 aaPredicted RBP15.21■□□□□ 0.03
SMG6-212ENST00000573153 C1QTNF12Q5T7M4 302 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 FAM91A1Q658Y4 838 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 C5orf46Q6UWT4 87 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 LINGO2Q7L985 606 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 YTHDF3Q7Z739 585 aaKnown RBP15.21■□□□□ 0.03
SMG6-212ENST00000573153 C11orf65Q8NCR3 313 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 MFSD8Q8NHS3 518 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 BOD1Q96IK1 185 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 Q96MF0 132 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 MED4Q9NPJ6 270 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 FGFR1OP2Q9NVK5 253 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 SEC14L4Q9UDX3 406 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 TESQ9UGI8 421 aaKnown RBP15.21■□□□□ 0.03
SMG6-212ENST00000573153 ANGPT4Q9Y264 503 aa15.21■□□□□ 0.03
SMG6-212ENST00000573153 PLCE1Q9P212 2302 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 NIPBLQ6KC79 2804 aaeCLIP15.2■□□□□ 0.02
SMG6-212ENST00000573153 TRIM64A6NGJ6 449 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 TRIM64BA6NI03 449 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 FBP2O00757 339 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 MFN2O95140 757 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 INHBBP09529 407 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 FAPQ12884 760 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 OR7A5Q15622 319 aa15.2■□□□□ 0.02
SMG6-212ENST00000573153 STK11Q15831 433 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms