RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 PGRP06401 933 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 IGHV4-31P0DP07 118 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 HOXB1P14653 301 aaPredicted RBP13.58□□□□□ -0.24
TSR1-202ENST00000571806 CEACAM7Q14002 265 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 C3orf36Q3SXR2 165 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 MRPL2Q5T653 305 aaKnown RBP13.58□□□□□ -0.24
TSR1-202ENST00000571806 WBP2NLQ6ICG8 309 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 FAM166AQ6J272 317 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 ZNF621Q6ZSS3 439 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 SPATA19Q7Z5L4 167 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 ANKFN1Q8N957 763 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 GLB1L3Q8NCI6 653 aaPredicted RBP13.58□□□□□ -0.24
TSR1-202ENST00000571806 HTRA1Q92743 480 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 OR52E6Q96RD3 313 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 ARMC7Q9H6L4 198 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 KCNS2Q9ULS6 477 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 MOKQ9UQ07 419 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 HEATR1Q9H583 2144 aaKnown RBP13.58□□□□□ -0.24
TSR1-202ENST00000571806 PLCE1Q9P212 2302 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 WDR91A4D1P6 747 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 CDHR4A6H8M9 788 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 A8MVM7 634 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 VSTM5A8MXK1 200 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 VWC2LB2RUY7 222 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 B9A039 149 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 ZNF587BE7ETH6 402 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 ATP6V1G2-DDX39BF2Z307 99 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 CHRM4P08173 479 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 HNF1AP20823 631 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 SERPINF1P36955 418 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 UBE2NP61088 152 aaKnown RBP13.57□□□□□ -0.24
TSR1-202ENST00000571806 SLC25A3Q00325 362 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 OR7A5Q15622 319 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 HMGN2P46Q86SG4 172 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 TMEM99Q8N816 258 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 FAM169BQ8N8A8 192 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 ZIC4Q8N9L1 334 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 MAGEE2Q8TD90 523 aaPredicted RBP13.57□□□□□ -0.24
TSR1-202ENST00000571806 FBXO17Q96EF6 278 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 AURKBQ96GD4 344 aaPredicted RBP13.57□□□□□ -0.24
TSR1-202ENST00000571806 SLC38A2Q96QD8 506 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 C20orf27Q9GZN8 174 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 THUMPD1Q9NXG2 353 aaKnown RBP13.57□□□□□ -0.24
TSR1-202ENST00000571806 P2RX2Q9UBL9 471 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 STAB1Q9NY15 2570 aa13.57□□□□□ -0.24
TSR1-202ENST00000571806 ARPC4-TTLL3A0A0A6YYG9 625 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 ZC3H12DA2A288 527 aaKnown RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 RGS16O15492 202 aaPredicted RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 AKR7A3O95154 331 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 SRD5A1P18405 259 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 NR4A2P43354 598 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 SH3BGRP55822 239 aaPredicted RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 VSNL1P62760 191 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 STX3Q13277 289 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 LARS2Q15031 903 aaKnown RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 AENQ8WTP8 325 aaKnown RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 ZNF385AQ96PM9 386 aaKnown RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 SORT1Q99523 831 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 CACYBPQ9HB71 228 aaKnown RBP13.56□□□□□ -0.24
TSR1-202ENST00000571806 CA10Q9NS85 328 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 AIG1Q9NVV5 245 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 ZNF232Q9UNY5 417 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 RASD1Q9Y272 281 aa13.56□□□□□ -0.24
TSR1-202ENST00000571806 IGHV1-18A0A0C4DH31 117 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 TMEM247A6NEH6 219 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 IL6P05231 212 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 ERCC1P07992 297 aaPredicted RBP13.55□□□□□ -0.24
TSR1-202ENST00000571806 TFPTP0C1Z6 253 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 APEHP13798 732 aaKnown RBP13.55□□□□□ -0.24
TSR1-202ENST00000571806 ZNF16P17020 682 aaPredicted RBP13.55□□□□□ -0.24
TSR1-202ENST00000571806 CDH2P19022 906 aaPredicted RBP13.55□□□□□ -0.24
TSR1-202ENST00000571806 CRISP3P54108 245 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 UFM1P61960 85 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 SQLEQ14534 574 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 EFNB3Q15768 340 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 KRT71Q3SY84 523 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 TBRG1Q3YBR2 411 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 HIKESHIQ53FT3 197 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 RNF220Q5VTB9 566 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 WDR93Q6P2C0 686 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 SLC46A3Q7Z3Q1 461 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 OR4F15Q8NGB8 312 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 OR1K1Q8NGR3 316 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 TEX37Q96LM6 180 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 LINC00470Q9BZP3 86 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 RAB1BQ9H0U4 201 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 CRNNQ9UBG3 495 aaPredicted RBP13.55□□□□□ -0.24
TSR1-202ENST00000571806 ALPK2Q86TB3 2170 aa13.55□□□□□ -0.24
TSR1-202ENST00000571806 LOC100289279A0A1B0GTE1 492 aa13.54□□□□□ -0.24
TSR1-202ENST00000571806 TRPC5OSA6NMA1 111 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms