RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 OR9K2Q8NGE7 335 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 BBS10Q8TAM1 723 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 SLC25A36Q96CQ1 311 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
RAB40B-204ENST00000571554 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 PRR14Q9BWN1 585 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 TAPBPLQ9BX59 468 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 RAD21L1Q9H4I0 556 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 INTS9Q9NV88 658 aaKnown RBP12.09□□□□□ -0.47
RAB40B-204ENST00000571554 THUMPD1Q9NXG2 353 aaKnown RBP12.09□□□□□ -0.47
RAB40B-204ENST00000571554 CISD1Q9NZ45 108 aaKnown RBP12.09□□□□□ -0.47
RAB40B-204ENST00000571554 VAPAQ9P0L0 249 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.09□□□□□ -0.47
RAB40B-204ENST00000571554 IFT52Q9Y366 437 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 NAV3Q8IVL0 2385 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 NSD1Q96L73 2696 aaPredicted RBP12.08□□□□□ -0.48
RAB40B-204ENST00000571554 AQP7P3A6NL99 342 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 A8MVM7 634 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 TPST1O60507 370 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 ARAFP10398 606 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 BMP2P12643 396 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 PAX1P15863 534 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 AQP1P29972 269 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 RPS5P46782 204 aaKnown RBP12.08□□□□□ -0.48
RAB40B-204ENST00000571554 MRPL19P49406 292 aaKnown RBP12.08□□□□□ -0.48
RAB40B-204ENST00000571554 SLC25A3Q00325 362 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 FADDQ13158 208 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 TNK1Q13470 666 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 VEZF1Q14119 521 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 GLIPR1L2Q4G1C9 344 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 LRIF1Q5T3J3 769 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 TMEM225Q6GV28 225 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 SLC22A25Q6T423 547 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 P2RY8Q86VZ1 359 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 KDM8Q8N371 416 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 ARMC7Q9H6L4 198 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 BCL2L10Q9HD36 194 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 SLC52A3Q9NQ40 469 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 SEC14L4Q9UDX3 406 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 GDF2Q9UK05 429 aaPredicted RBP12.08□□□□□ -0.48
RAB40B-204ENST00000571554 POU2F3Q9UKI9 436 aa12.08□□□□□ -0.48
RAB40B-204ENST00000571554 TMEM229AB2RXF0 380 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 OVOL3O00110 214 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 PDLIM1O00151 329 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 AHSA1O95433 338 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 CD8AP01732 235 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 CBLP22681 906 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 CD40P25942 277 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 HTR2AP28223 471 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 PCSK6P29122 969 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 SELENOPP49908 381 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 P2RY4P51582 365 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 MAP2K6P52564 334 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 CDK6Q00534 326 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 SQLEQ14534 574 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 CLEC12BQ2HXU8 276 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 PRAMEF8Q5VWM4 474 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 PRAMEF7Q5VXH5 474 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 TMEM108Q6UXF1 575 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 B3GLCTQ6Y288 498 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 WDR31Q8NA23 367 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 RNF217Q8TC41 542 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 HTRA1Q92743 480 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 KTI12Q96EK9 354 aaPredicted RBP12.07□□□□□ -0.48
RAB40B-204ENST00000571554 TRMT61AQ96FX7 289 aaKnown RBP12.07□□□□□ -0.48
RAB40B-204ENST00000571554 MUS81Q96NY9 551 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 ALKBH3Q96Q83 286 aaPredicted RBP12.07□□□□□ -0.48
RAB40B-204ENST00000571554 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
RAB40B-204ENST00000571554 ALG2Q9H553 416 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 PARPBPQ9NWS1 579 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 RPS6KB2Q9UBS0 482 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 DCTN4Q9UJW0 460 aa12.07□□□□□ -0.48
RAB40B-204ENST00000571554 FN1P02751 2386 aaKnown RBP12.07□□□□□ -0.48
RAB40B-204ENST00000571554 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 TRBV5-3A0A0A0MS03 114 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 ELOA3DA6NLF2 546 aaPredicted RBP12.06□□□□□ -0.48
RAB40B-204ENST00000571554 E7EQL1 145 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 NPIPB7O75200 414 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 KRT33AO76009 404 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 IGHV4-39P01824 125 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 ACVR1BP36896 505 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 EGR4Q05215 589 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 SCARB2Q14108 478 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 ELOA3BQ3SY89 546 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 HIKESHIQ53FT3 197 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 OR7E24Q6IFN5 339 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 REEP3Q6NUK4 255 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 KLHL17Q6TDP4 642 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 CREB3L2Q70SY1 520 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 HDXQ7Z353 690 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 ELOA3Q8NG57 546 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 CKAP2Q8WWK9 683 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 TMEM45BQ96B21 275 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 WFDC6Q9BQY6 131 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 CPPED1Q9BRF8 314 aaPredicted RBP12.06□□□□□ -0.48
RAB40B-204ENST00000571554 PTDSS2Q9BVG9 487 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms