RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SERINC2Q96SA4 455 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 MICU1Q9BPX6 476 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 TEX101Q9BY14 249 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP43-202ENST00000570475 ZMAT3Q9HA38 289 aaKnown RBP14.11□□□□□ -0.15
USP43-202ENST00000570475 ADGRL4Q9HBW9 690 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 A0A087WV48 116 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 CDC14CA4D256 554 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 TRIM3O75382 744 aaPredicted RBP14.11□□□□□ -0.15
USP43-202ENST00000570475 KLF8O95600 359 aaPredicted RBP14.11□□□□□ -0.15
USP43-202ENST00000570475 RAF1P04049 648 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 ZIC1Q15915 447 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 GALNT11Q8NCW6 608 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 HSD17B8Q92506 261 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 DVL3Q92997 716 aaPredicted RBP14.11□□□□□ -0.15
USP43-202ENST00000570475 PRSS27Q9BQR3 290 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 PITHD1Q9GZP4 211 aaPredicted RBP14.11□□□□□ -0.15
USP43-202ENST00000570475 POLMQ9NP87 494 aaPredicted RBP14.11□□□□□ -0.15
USP43-202ENST00000570475 HEBP2Q9Y5Z4 205 aa14.11□□□□□ -0.15
USP43-202ENST00000570475 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 BHLHE40O14503 412 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 GPR75O95800 540 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 TFF2Q03403 129 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 PLA1AQ53H76 456 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 GALNT6Q8NCL4 622 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 OR2T4Q8NH00 348 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 MOSPD2Q8NHP6 518 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 NSMAFQ92636 917 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 GIMAP5Q96F15 307 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 OR2M2Q96R28 347 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 MRPS18AQ9NVS2 196 aaKnown RBP14.1□□□□□ -0.15
USP43-202ENST00000570475 HRKO00198 91 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 HIST1H2ABP04908 130 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 ARHGDIBP52566 201 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 FXYD6P3P58550 94 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 ACTC1P68032 377 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 ACTA1P68133 377 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 BTN1A1Q13410 526 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 HIST3H2AQ7L7L0 130 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 ZNF627Q7L945 461 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 HIST1H2ACQ93077 130 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 PMEPA1Q969W9 287 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 TIMM29Q9BSF4 260 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 PNO1Q9NRX1 252 aaKnown RBP14.1□□□□□ -0.15
USP43-202ENST00000570475 LINC01553A4QN01 128 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 GPANK1O95872 356 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 SRMP19623 302 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 PTH2RP49190 550 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 CTXN1P60606 82 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 EFNB1P98172 346 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 DUSP8Q13202 625 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 Q6ZTK2 550 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 ADAMTS14Q8WXS8 1223 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 MED30Q96HR3 178 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 PRDM9Q9NQV7 894 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 LRIT1Q9P2V4 623 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 ZMIZ1Q9ULJ6 1067 aa14.1□□□□□ -0.15
USP43-202ENST00000570475 FARSAQ9Y285 508 aaKnown RBP14.1□□□□□ -0.15
USP43-202ENST00000570475 PEX14O75381 377 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 TSPAN9O75954 239 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 ADH1BP00325 375 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 PSMB1P20618 241 aaKnown RBP14.09□□□□□ -0.15
USP43-202ENST00000570475 CLPPQ16740 277 aaPredicted RBP14.09□□□□□ -0.15
USP43-202ENST00000570475 PCGF3Q3KNV8 242 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 SLC35D2Q76EJ3 337 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 TPRA1Q86W33 373 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 ANKRD19PQ9H560 264 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 ERVK-19Q9WJR5 959 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 A0A1B0GVI7 797 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 ITGA10O75578 1167 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 CFDP00746 253 aaPredicted RBP14.09□□□□□ -0.15
USP43-202ENST00000570475 BTG1P62324 171 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 TNK1Q13470 666 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 SCGB2B2Q4G0G5 96 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 SLC22A10Q63ZE4 541 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 KIRREL2Q6UWL6 708 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 OR56B4Q8NH76 319 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 ZPLD1Q8TCW7 415 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 BRIX1Q8TDN6 353 aaKnown RBP14.09□□□□□ -0.15
USP43-202ENST00000570475 MRPL48Q96GC5 212 aaKnown RBP14.09□□□□□ -0.15
USP43-202ENST00000570475 PLA2G2FQ9BZM2 168 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 OR8D2Q9GZM6 311 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 C12orf4Q9NQ89 552 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 KLHL9Q9P2J3 617 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 NCDNQ9UBB6 729 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 LAMP5Q9UJQ1 280 aa14.09□□□□□ -0.15
USP43-202ENST00000570475 SPDEFO95238 335 aa14.08□□□□□ -0.15
USP43-202ENST00000570475 ENPP1P22413 925 aa14.08□□□□□ -0.15
USP43-202ENST00000570475 KCTD12Q96CX2 325 aaKnown RBP14.08□□□□□ -0.15
USP43-202ENST00000570475 KCNJ15Q99712 375 aa14.08□□□□□ -0.15
USP43-202ENST00000570475 PDCD10Q9BUL8 212 aa14.08□□□□□ -0.15
USP43-202ENST00000570475 RXFP3Q9NSD7 469 aa14.08□□□□□ -0.15
USP43-202ENST00000570475 FLRT3Q9NZU0 649 aa14.08□□□□□ -0.15
USP43-202ENST00000570475 TRAV18A0A075B6X5 111 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 GTF2F2P13984 249 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 IL9P15248 144 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 MNDAP41218 407 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 AP3S2P59780 193 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 LGALSLQ3ZCW2 172 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 C7orf61Q8IZ16 206 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms