RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 OR52E6Q96RD3 313 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 VRK1Q99986 396 aaPredicted RBP7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 AMBRA1Q9C0C7 1298 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 SHARPINQ9H0F6 387 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 WDR55Q9H6Y2 383 aaPredicted RBP7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 MTHFD2LQ9H903 347 aaPredicted RBP7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 KCNK9Q9NPC2 374 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC6A13Q9NSD5 602 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 CDC42EP3Q9UKI2 254 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 AMDHD2Q9Y303 409 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 PMF1-BGLAPU3KQ54 211 aa7.52□□□□□ -1.21
CTDNEP1-203ENST00000570385 A0A096LPE4 126 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SDHDO14521 159 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 BIRC5O15392 142 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 RGS16O15492 202 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 LMX1BO60663 402 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 F12P00748 615 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 PGRP06401 933 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 GPIP06744 558 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 DBIP07108 87 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 KITP10721 976 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 BMP4P12644 408 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 ETFAP13804 333 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 IGFBP5P24593 272 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 FKBP2P26885 142 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 EPHA3P29320 983 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SELENOPP49908 381 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 LSM11P83369 360 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 BST1Q10588 318 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 STX3Q13277 289 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 GNA13Q14344 377 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 MAPK11Q15759 364 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SWI5Q1ZZU3 235 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 KRTAP24-1Q3LI83 254 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 ATG16L1Q676U5 607 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 LINGO2Q7L985 606 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC46A3Q7Z3Q1 461 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 CMIPQ8IY22 773 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 PEX5LQ8IYB4 626 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 KDM8Q8N371 416 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 CLIP4Q8N3C7 705 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 C17orf78Q8N4C9 275 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 TRIML2Q8N7C3 387 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 ANKRD42Q8N9B4 389 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 OR52P1PQ8NH57 321 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 OIT3Q8WWZ8 545 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 PROX1Q92786 737 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SORCS2Q96PQ0 1159 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 ALKBH3Q96Q83 286 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 ADAM19Q9H013 955 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 SEC61A2Q9H9S3 476 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 MEAF6Q9HAF1 191 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 AIG1Q9NVV5 245 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 BTNL2Q9UIR0 455 aa7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-203ENST00000570385 CUBNO60494 3623 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 IGHV1-18A0A0C4DH31 117 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 IGHV4-61A0A0C4DH41 118 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 LOC100289279A0A1B0GTE1 492 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 AQP7P3A6NL99 342 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 RFXANKO14593 260 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 FRS3O43559 492 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 UPK3AO75631 287 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 WNT11O96014 354 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 BCHEP06276 602 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 UQCRBP14927 111 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 NCF2P19878 526 aaPredicted RBP7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 RPS4Y1P22090 263 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 SERPINF1P36955 418 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 ACAA2P42765 397 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 CRATP43155 626 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 PDLIM4P50479 330 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 ANXA11P50995 505 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 UBE2NP61088 152 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 HOXC5Q00444 222 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 TBRG1Q3YBR2 411 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 GTDC1Q4AE62 458 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 IQCCQ4KMZ1 466 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 PRAMEF8Q5VWM4 474 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 PRAMEF7Q5VXH5 474 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 NXNQ6DKJ4 435 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 NIPAL3Q6P499 406 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 EPHX4Q8IUS5 362 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 LRRC34Q8IZ02 419 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 POMGNT2Q8NAT1 580 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 OR1K1Q8NGR3 316 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 MGARPQ8TDB4 240 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 TMEM45BQ96B21 275 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 SLC25A36Q96CQ1 311 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 ZBTB18Q99592 522 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 KCNS3Q9BQ31 491 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 TMEM109Q9BVC6 243 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 PRR14Q9BWN1 585 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 TAPBPLQ9BX59 468 aa7.5□□□□□ -1.21
CTDNEP1-203ENST00000570385 CA10Q9NS85 328 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms