RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 HLA-DQB1P01920 261 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 LIMS3P0CW19 117 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 LIMS4P0CW20 117 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 EMDP50402 254 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 PPP3R1P63098 170 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 RNF4P78317 190 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 DUSP8Q13202 625 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 EBPQ15125 230 aaKnown RBP14.09□□□□□ -0.15
VAC14-211ENST00000568886 RASSF6Q6ZTQ3 369 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 SLC29A4Q7RTT9 530 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 ZNF321PQ8N8H1 164 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 ASCC1Q8N9N2 400 aaKnown RBP14.09□□□□□ -0.15
VAC14-211ENST00000568886 SIMC1Q8NDZ2 872 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 ANKK1Q8NFD2 765 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 OR8D4Q8NGM9 314 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 OR52P1PQ8NH57 321 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 SLC9A6Q92581 669 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 COQ7Q99807 217 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 DEFB126Q9BYW3 111 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 ANKRD19PQ9H560 264 aa14.09□□□□□ -0.15
VAC14-211ENST00000568886 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 TRBV11-1A0A0K0K1C0 115 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 LINC00854A0A1B0GVQ3 168 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 TRDV1A0A1B0GX56 115 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 TFECO14948 347 aaPredicted RBP14.08□□□□□ -0.16
VAC14-211ENST00000568886 HCN1O60741 890 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 PTGER1P34995 402 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 LASP1Q14847 261 aaKnown RBP14.08□□□□□ -0.16
VAC14-211ENST00000568886 EXOSC7Q15024 291 aaKnown RBP14.08□□□□□ -0.16
VAC14-211ENST00000568886 TMEM44Q2T9K0 475 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 EXOSC6Q5RKV6 272 aaKnown RBP14.08□□□□□ -0.16
VAC14-211ENST00000568886 C9orf40Q8IXQ3 194 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 ZNF441Q8N8Z8 693 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 SYT14Q8NB59 555 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 POGLUT1Q8NBL1 392 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 NUP43Q8NFH3 380 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 C16orf52Q8NHV5 167 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 GATAD2BQ8WXI9 593 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 GIMAP5Q96F15 307 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 THOC3Q96J01 351 aaKnown RBP14.08□□□□□ -0.16
VAC14-211ENST00000568886 RNF170Q96K19 258 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 VSTM2LQ96N03 204 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 ARHGDIGQ99819 225 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 PRORYQ9H606 182 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 MARCH7Q9H992 704 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 ANKRD11Q6UB99 2663 aaPredicted RBP14.08□□□□□ -0.16
VAC14-211ENST00000568886 NINQ8N4C6 2090 aa14.08□□□□□ -0.16
VAC14-211ENST00000568886 CENPBD1B2RD01 187 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 SCO2O43819 266 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 APOL3O95236 402 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 HMGN2P05204 90 aaKnown RBP14.07□□□□□ -0.16
VAC14-211ENST00000568886 MYL9P24844 172 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 TAS2R41P59536 307 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 CXADRP78310 365 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 FABP5Q01469 135 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 TRAM2Q15035 370 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 PYDC2Q56P42 97 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 C6orf183Q5T699 404 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 LCN1P1Q5VSP4 162 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 PSMF1Q92530 271 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 DIO2Q92813 273 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 OTUB1Q96FW1 271 aaPredicted RBP14.07□□□□□ -0.16
VAC14-211ENST00000568886 FRMD6Q96NE9 622 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 TM9SF2Q99805 663 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 SOSTQ9BQB4 213 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 LMF2Q9BU23 707 aaKnown RBP14.07□□□□□ -0.16
VAC14-211ENST00000568886 WWTR1Q9GZV5 400 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 RNF121Q9H920 327 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 CTPS2Q9NRF8 586 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 DMXL2Q8TDJ6 3036 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 A8MV72 311 aaPredicted RBP14.07□□□□□ -0.16
VAC14-211ENST00000568886 PLA2G10O15496 165 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 CELA2AP08217 269 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 ZNF24P17028 368 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 ITGA3P26006 1051 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 PTBP1P26599 531 aaKnown RBP eCLIP14.07□□□□□ -0.164e-17■■■□□ 18.8
VAC14-211ENST00000568886 MAP3K8P41279 467 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 SLC1A3P43003 542 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 PPICP45877 212 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 PRKAG1P54619 331 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 GPAT3Q53EU6 434 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 METAP1DQ6UB28 335 aaPredicted RBP14.07□□□□□ -0.16
VAC14-211ENST00000568886 HMGN2P46Q86SG4 172 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 CDRT4Q8N9R6 151 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 RFKQ969G6 155 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 ADIPOR1Q96A54 375 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 CNTNAP3BQ96NU0 1288 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 YIPF4Q9BSR8 244 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 CNTNAP3Q9BZ76 1288 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 RERGLQ9H628 205 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 FOLH1BQ9HBA9 442 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 GPR52Q9Y2T5 361 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 PCDHGA9Q9Y5G4 932 aaKnown RBP14.07□□□□□ -0.16
VAC14-211ENST00000568886 NOX1Q9Y5S8 564 aa14.07□□□□□ -0.16
VAC14-211ENST00000568886 ACSM1Q08AH1 577 aa14.06□□□□□ -0.16
VAC14-211ENST00000568886 ST3GAL3Q11203 375 aa14.06□□□□□ -0.16
VAC14-211ENST00000568886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.06□□□□□ -0.16
VAC14-211ENST00000568886 MFSD12Q6NUT3 480 aa14.06□□□□□ -0.16
VAC14-211ENST00000568886 ATP6V1C2Q8NEY4 427 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms