RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ADSLP30566 484 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 PRKAR1BP31321 381 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 NTF4P34130 210 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 IDUAP35475 653 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 PTH2RP49190 550 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 AQP5P55064 265 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 RPS4XP62701 263 aaKnown RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 TGFBR3Q03167 851 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 BSPH1Q075Z2 132 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 FAPQ12884 760 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CEACAM7Q14002 265 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SQLEQ14534 574 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SLC17A1Q14916 467 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 OR7A5Q15622 319 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 STK11Q15831 433 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ZNF672Q499Z4 452 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 AGKQ53H12 422 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ZNF311Q5JNZ3 666 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 RPS26P11Q5JNZ5 115 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 PAGE3Q5JUK9 113 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 OTUD3Q5T2D3 398 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 GCNT6Q5T4J0 391 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 C1QTNF12Q5T7M4 302 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 OR7E24Q6IFN5 339 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ALKBH2Q6NS38 261 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 REEP3Q6NUK4 255 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CASP12Q6UXS9 341 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 YTHDF3Q7Z739 585 aaKnown RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 SERPINA11Q86U17 422 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 KRT73Q86Y46 540 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 MSRB3Q8IXL7 192 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CLIP4Q8N3C7 705 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CADM2Q8N3J6 435 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 C1orf162Q8NEQ5 155 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 BHLHE22Q8NFJ8 381 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 STK35Q8TDR2 534 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CKAP2Q8WWK9 683 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
CLK3-219ENST00000567805 MAL2Q969L2 176 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 TMEM45BQ96B21 275 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 RADILQ96JH8 1075 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 Q96MF0 132 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SIKE1Q9BRV8 207 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 BDH2Q9BUT1 245 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SPATA5L1Q9BVQ7 753 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SF3B5Q9BWJ5 86 aaKnown RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 TAPBPLQ9BX59 468 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 TRIM2Q9C040 744 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 RABEP2Q9H5N1 569 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 TMEM38AQ9H6F2 299 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 C12orf10Q9HB07 376 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SLC52A3Q9NQ40 469 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ZNF701Q9NV72 531 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 SLC25A37Q9NYZ2 338 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 VAPAQ9P0L0 249 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 UPB1Q9UBR1 384 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 DCTN4Q9UJW0 460 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 TRIM33Q9UPN9 1127 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CORO2BQ9UQ03 480 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 CHST2Q9Y4C5 530 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 FLVCR1Q9Y5Y0 555 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 SETD2Q9BYW2 2564 aaPredicted RBP4.22□□□□□ -1.73
CLK3-219ENST00000567805 CUBNO60494 3623 aa4.22□□□□□ -1.73
CLK3-219ENST00000567805 C2CD3Q4AC94 2353 aa4.21□□□□□ -1.73
CLK3-219ENST00000567805 TRBV5-3A0A0A0MS03 114 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 A0A1W2PP18 115 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 PRORSD1PA6NEY8 169 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 DPRXA6NFQ7 191 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 OR6C65A6NJZ3 312 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ELOA3DA6NLF2 546 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 CCT8L1PA6NM43 557 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 OVOL3O00110 214 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 PDLIM1O00151 329 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ABCD4O14678 606 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 FRS3O43559 492 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 FZD7O75084 574 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 NPIPB7O75200 414 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 RAD51DO75771 328 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 AKR7A3O95154 331 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 VAMP5O95183 116 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 IGHV3-9P01782 118 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 HEXAP06865 529 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ITGA5P08648 1049 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 DANCRP0C864 163 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 PNMTP11086 282 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 H2AFXP16104 143 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 GPX2P18283 190 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 SLC6A2P23975 617 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 PTAFRP25105 342 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 MPGP29372 298 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 P2RY4P51582 365 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ATP5J2P56134 94 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 NCALDP61601 193 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 CDK6Q00534 326 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 BNIP2Q12982 314 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ETFDHQ16134 617 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms