RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 NCF2P19878 526 aaPredicted RBP10.47□□□□□ -0.73
UBR1-206ENST00000566493 EPHA3P29320 983 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 MPGP29372 298 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 IL12AP29459 219 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 CRATP43155 626 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 FOXG1P55316 489 aaPredicted RBP10.47□□□□□ -0.73
UBR1-206ENST00000566493 PRPS1P60891 318 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 LARS2Q15031 903 aaKnown RBP10.47□□□□□ -0.73
UBR1-206ENST00000566493 OR7A5Q15622 319 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 ZSWIM7Q19AV6 140 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 LIN52Q52LA3 116 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 COX20Q5RI15 118 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 TSPO2Q5TGU0 170 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 TMEM225Q6GV28 225 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 WBP2NLQ6ICG8 309 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 C11orf71Q6IPW1 123 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 PODNL1Q6PEZ8 512 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 GPAT4Q86UL3 456 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 HIPK1Q86Z02 1210 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 CADM2Q8N3J6 435 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 TMEM99Q8N816 258 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 WDR31Q8NA23 367 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 POMGNT2Q8NAT1 580 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 OR9K2Q8NGE7 335 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 OR52P1PQ8NH57 321 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 TMEM45BQ96B21 275 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 ZBTB9Q96C00 473 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 AMBRA1Q9C0C7 1298 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 ADAM19Q9H013 955 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 ARMC7Q9H6L4 198 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
UBR1-206ENST00000566493 RMND5AQ9H871 391 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 THAP1Q9NVV9 213 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 ZNF232Q9UNY5 417 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
UBR1-206ENST00000566493 CDHR4A6H8M9 788 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 LIPT2A6NK58 231 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 AQP7P3A6NL99 342 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 A8MVM7 634 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 H7C417 338 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 SLC22A3O75751 556 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 AKR7A3O95154 331 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 GKN3PP0CG01 181 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 SLC25A16P16260 332 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 CDH2P19022 906 aaPredicted RBP10.46□□□□□ -0.73
UBR1-206ENST00000566493 APOBEC3AP31941 199 aaPredicted RBP10.46□□□□□ -0.73
UBR1-206ENST00000566493 CRISP3P54108 245 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 DSTNP60981 165 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 CHRFAM7AQ494W8 412 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 PDCD4Q53EL6 469 aaKnown RBP10.46□□□□□ -0.73
UBR1-206ENST00000566493 TNFAIP8L3Q5GJ75 292 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 ATG16L1Q676U5 607 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 B3GLCTQ6Y288 498 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 ZNF836Q6ZNA1 936 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 VRK2Q86Y07 508 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 OR10H5Q8NGA6 315 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 FAM168AQ92567 244 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 AURKBQ96GD4 344 aaPredicted RBP10.46□□□□□ -0.73
UBR1-206ENST00000566493 KCNS3Q9BQ31 491 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 PIF1Q9H611 641 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 RLIMQ9NVW2 624 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 ADPRHL2Q9NX46 363 aa10.46□□□□□ -0.73
UBR1-206ENST00000566493 THUMPD1Q9NXG2 353 aaKnown RBP10.46□□□□□ -0.73
UBR1-206ENST00000566493 A0A096LPI6 279 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 GPRIN2O60269 458 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 VAMP5O95183 116 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 BCHEP06276 602 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 CSF3P09919 207 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 TFPTP0C1Z6 253 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 ETFAP13804 333 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 PAX7P23759 505 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 MMP16P51512 607 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 ZNF525Q8N782 197 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 ZIC4Q8N9L1 334 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 MGARPQ8TDB4 240 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 HTRA1Q92743 480 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 ITCHQ96J02 903 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 ZNF385AQ96PM9 386 aaKnown RBP10.45□□□□□ -0.74
UBR1-206ENST00000566493 TNFRSF13CQ96RJ3 184 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 TPT1P8Q9HAU6 139 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 OBP2BQ9NPH6 170 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 TMEM45AQ9NWC5 275 aa10.45□□□□□ -0.74
UBR1-206ENST00000566493 ZNF443Q9Y2A4 671 aaPredicted RBP10.45□□□□□ -0.74
UBR1-206ENST00000566493 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
UBR1-206ENST00000566493 ABCA1O95477 2261 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 DSPPQ9NZW4 1301 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 A0A0G2JPF8 293 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 TMEM120BA0PK00 339 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 OR6C65A6NJZ3 312 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 ELOA3DA6NLF2 546 aaPredicted RBP10.44□□□□□ -0.74
UBR1-206ENST00000566493 HNRNPCL2B2RXH8 293 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 HNRNPCL3B7ZW38 293 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 ZNF587BE7ETH6 402 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 ATP6V1G2-DDX39BF2Z307 99 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 KLF11O14901 512 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 HNRNPCL1O60812 293 aaKnown RBP10.44□□□□□ -0.74
UBR1-206ENST00000566493 SNNO75324 88 aaPredicted RBP10.44□□□□□ -0.74
UBR1-206ENST00000566493 ZCCHC18P0CG32 403 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 HNRNPCL4P0DMR1 293 aa10.44□□□□□ -0.74
UBR1-206ENST00000566493 GTF2E2P29084 291 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms