RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZDHHC11BP0C7U3 371 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ZNF806P0C7X5 589 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 KRT13P13646 458 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 EZRP15311 586 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 GABRG2P18507 467 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ANXA13P27216 316 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 HOXA9P31269 272 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ATP5C1P36542 298 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 NUDT1P36639 197 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 RPS9P46781 194 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 STK19P49842 368 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 NOVA1P51513 510 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 TPMTP51580 245 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 YWHAGP61981 247 aaKnown RBP eCLIP1.03□□□□□ -2.24
SMG1-212ENST00000566328 RPS14P62263 151 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 RPL32P62910 135 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 TNNC1P63316 161 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 NOP14P78316 857 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 SLC7A9P82251 487 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ZNF33AQ06730 810 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ADIGQ0VDE8 80 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 NME3Q13232 169 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 SRSF6Q13247 344 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 C1orf61Q13536 156 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 CUL2Q13617 745 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 IHHQ14623 411 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 RPS6KA1Q15418 735 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 GOLGA7BQ2TAP0 167 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 FUT11Q495W5 492 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 CFAP221Q4G0U5 840 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 CCDC40Q4G0X9 1142 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ZCWPW2Q504Y3 356 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 FAM133BQ5BKY9 247 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 OR2B11Q5JQS5 317 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TPRG1LQ5T0D9 272 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 C9orf64Q5T6V5 341 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 FAM91A1Q658Y4 838 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 KCTD16Q68DU8 428 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 OR6B2Q6IFH4 312 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TRAT1Q6PIZ9 186 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TMEM182Q6ZP80 229 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 RFLNAQ6ZTI6 216 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 FAM183BPQ6ZVS7 135 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 LUZP1Q86V48 1076 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 RALGPS2Q86X27 583 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 WDR49Q8IV35 697 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 MMAAQ8IVH4 418 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 CD302Q8IX05 232 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 PYROXD2Q8N2H3 581 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 STK40Q8N2I9 435 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TMEM86AQ8N2M4 240 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 HDDC3Q8N4P3 179 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 EID2Q8N6I1 236 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 LRRC52Q8N7C0 313 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 KCTD6Q8NC69 237 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TSTD1Q8NFU3 115 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 JOSD2Q8TAC2 188 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 SPPL2BQ8TCT7 592 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 UBTD2Q8WUN7 234 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 NAT14Q8WUY8 206 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ZNF606Q8WXB4 792 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 DCUN1D4Q92564 292 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 MRPS31Q92665 395 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 MYDGFQ969H8 173 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 NEIL2Q969S2 332 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 SMARCD1Q96GM5 515 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TMEM101Q96IK0 257 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 SPATA17Q96L03 361 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 FER1L6-AS2Q96M78 137 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 NAP1L5Q96NT1 182 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 CPXM1Q96SM3 734 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 S1PR3Q99500 378 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 FEM1AQ9BSK4 669 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TIPINQ9BVW5 301 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 HSD3B7Q9H2F3 369 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TCEAL2Q9H3H9 227 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 ALG9Q9H6U8 611 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 C8orf33Q9H7E9 229 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 SUDS3Q9H7L9 328 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 SLC25A19Q9HC21 320 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 CSNK1G1Q9HCP0 422 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 PRSS16Q9NQE7 514 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 PRMT8Q9NR22 394 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 MMP26Q9NRE1 261 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ABCB8Q9NUT2 735 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 GPATCH2LQ9NWQ4 482 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ELOVL2Q9NXB9 296 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 IL37Q9NZH6 218 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 DEC1Q9P2X7 70 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ARMCX3Q9UH62 379 aaPredicted RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 DNAJC12Q9UKB3 198 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 RAB23Q9ULC3 237 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 VANGL2Q9ULK5 521 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 EXOC7Q9UPT5 735 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 TRAF3IP3Q9Y228 551 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 SLC9A8Q9Y2E8 581 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 MFHAS1Q9Y4C4 1052 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ASB3Q9Y575 518 aa1.03□□□□□ -2.24
SMG1-212ENST00000566328 ASH1LQ9NR48 2969 aaKnown RBP1.03□□□□□ -2.24
SMG1-212ENST00000566328 OBSL1O75147 1896 aa1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms