RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AQP7P3A6NL99 342 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 HNRNPCL2B2RXH8 293 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 HNRNPCL3B7ZW38 293 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 M0R1B8 84 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 HNRNPCL1O60812 293 aaKnown RBP16.07■□□□□ 0.16
USB1-213ENST00000566292 GPIP06744 558 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 HNRNPCL4P0DMR1 293 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 HOXB9P17482 250 aaPredicted RBP16.07■□□□□ 0.16
USB1-213ENST00000566292 P2RY4P51582 365 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 LARS2Q15031 903 aaKnown RBP16.07■□□□□ 0.16
USB1-213ENST00000566292 RGNQ15493 299 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 C11orf71Q6IPW1 123 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 SLC2A7Q6PXP3 512 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 SLC22A25Q6T423 547 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 KLHL17Q6TDP4 642 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 SERPINA11Q86U17 422 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 C3orf49Q96BT1 292 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 ZNF385AQ96PM9 386 aaKnown RBP16.07■□□□□ 0.16
USB1-213ENST00000566292 SF3B5Q9BWJ5 86 aaKnown RBP16.07■□□□□ 0.16
USB1-213ENST00000566292 SPATA9Q9BWV2 254 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 REG4Q9BYZ8 158 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 SLC17A5Q9NRA2 495 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 PRDM4Q9UKN5 801 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 B3GALT5Q9Y2C3 310 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 A8MVM7 634 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 FRS3O43559 492 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 ERLIN1O75477 346 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 TTKP33981 857 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 COPZ1P61923 177 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 PPP2R2BQ00005 443 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 AGAP6Q5VW22 663 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 C1orf162Q8NEQ5 155 aaPredicted RBP16.06■□□□□ 0.16
USB1-213ENST00000566292 MAL2Q969L2 176 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 RSPO3Q9BXY4 272 aaPredicted RBP16.06■□□□□ 0.16
USB1-213ENST00000566292 ADPRHL2Q9NX46 363 aa16.06■□□□□ 0.16
USB1-213ENST00000566292 THUMPD1Q9NXG2 353 aaKnown RBP16.06■□□□□ 0.16
USB1-213ENST00000566292 YLPM1P49750 1951 aaKnown RBP16.06■□□□□ 0.16
USB1-213ENST00000566292 KIAA1324LA8MWY0 1029 aaPredicted RBP16.05■□□□□ 0.16
USB1-213ENST00000566292 TMEM229AB2RXF0 380 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 CLIC1O00299 241 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 NPIPB7O75200 414 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 BMP2P12643 396 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 NCF2P19878 526 aaPredicted RBP16.05■□□□□ 0.16
USB1-213ENST00000566292 MPGP29372 298 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 MRPL19P49406 292 aaKnown RBP16.05■□□□□ 0.16
USB1-213ENST00000566292 IRX1P78414 480 aaPredicted RBP16.05■□□□□ 0.16
USB1-213ENST00000566292 ZSWIM7Q19AV6 140 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 C1orf140Q5VVS0 124 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 AAED1Q7RTV5 226 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 GPAT4Q86UL3 456 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 C17orf78Q8N4C9 275 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 HS6ST2Q96MM7 605 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 DHRS9Q9BPW9 319 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 CACNG6Q9BXT2 260 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 PIF1Q9H611 641 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 BCL2L10Q9HD36 194 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 A4GALTQ9NPC4 353 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 CBLN4Q9NTU7 201 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 POU2F3Q9UKI9 436 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 ZNF232Q9UNY5 417 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 AMDHD2Q9Y303 409 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 IFT52Q9Y366 437 aa16.05■□□□□ 0.16
USB1-213ENST00000566292 ARFGEF3Q5TH69 2177 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 TMEM247A6NEH6 219 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 HOXC5Q00444 222 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 TGFBR3Q03167 851 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 FADDQ13158 208 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 ZNF311Q5JNZ3 666 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 AGBL2Q5U5Z8 902 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 PRAMEF8Q5VWM4 474 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 PRAMEF7Q5VXH5 474 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 FUNDC1Q8IVP5 155 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 MSRB3Q8IXL7 192 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 TAPBPLQ9BX59 468 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 BARX1Q9HBU1 254 aaPredicted RBP16.04■□□□□ 0.16
USB1-213ENST00000566292 SLCO1B3Q9NPD5 702 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 TCF7L2Q9NQB0 619 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 SLC25A37Q9NYZ2 338 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 SLAMF8Q9P0V8 285 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 ADAM21Q9UKJ8 722 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 DNHD1Q96M86 4753 aa16.04■□□□□ 0.16
USB1-213ENST00000566292 A0A096LPI6 279 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 SSX4O60224 188 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 SELENOPP49908 381 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 EGR4Q05215 589 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 LGALS3BPQ08380 585 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 NRF1Q16656 503 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 LRIF1Q5T3J3 769 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 TMEM225Q6GV28 225 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 CREB3L2Q70SY1 520 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 C10orf111Q8N326 155 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 MUC15Q8N387 334 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 POMGNT2Q8NAT1 580 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 BBS10Q8TAM1 723 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 STK35Q8TDR2 534 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 EBF4Q9BQW3 602 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 PTDSS2Q9BVG9 487 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 RAD21L1Q9H4I0 556 aa16.03■□□□□ 0.16
USB1-213ENST00000566292 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms