RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PDZD2O15018 2839 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 A0A087WUJ7 227 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 SH3D21A4FU49 640 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 LIPT2A6NK58 231 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 CPSF4LA6NMK7 179 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 A6NNC1 897 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 ZNF724A8MTY0 619 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 B2RBV5 119 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 ZNF814B7Z6K7 855 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 CTAG2O75638 210 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 GOSR1O95249 250 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 PNMTP11086 282 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 HSD17B1P14061 328 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 NCK1P16333 377 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 GGT1P19440 569 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 FPR1P21462 350 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 IDUAP35475 653 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 UGT2B10P36537 528 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 CDH12P55289 794 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 SELENOWP63302 87 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 H3F3AP84243 136 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 EGR4Q05215 589 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 CEACAM7Q14002 265 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 PDK3Q15120 406 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 EXOC3L2Q2M3D2 409 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 C1orf140Q5VVS0 124 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 ABLIM2Q6H8Q1 611 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 ZNF613Q6PF04 617 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 TRPM8Q7Z2W7 1104 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 NUFIP2Q7Z417 695 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 DEFB107AQ8IZN7 70 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 FAM156AQ8NDB6 213 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 TPD52L3Q96J77 140 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 PCDHAC1Q9H158 963 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 CD300AQ9UGN4 299 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 EGFL7Q9UHF1 273 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 POLQO75417 2590 aa12.29□□□□□ -0.44
HERPUD1-210ENST00000565966 IGKV1D-42A0A075B6H8 117 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 CASKO14936 926 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 LYPD3O95274 346 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 THY1P04216 161 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 GPIP06744 558 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 CALB2P22676 271 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 OR1E2P47887 323 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 OR7A5Q15622 319 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 SWT1Q5T5J6 900 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 GLYATQ6IB77 296 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 CBLL1Q75N03 491 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 RNF217Q8TC41 542 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 ADAMTS16Q8TE57 1224 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 KTI12Q96EK9 354 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 WFIKKN1Q96NZ8 548 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 ZNF300Q96RE9 604 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 PTDSS2Q9BVG9 487 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 KLHL4Q9C0H6 718 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 ADPRHL2Q9NX46 363 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 SELENONQ9NZV5 590 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 EMC3Q9P0I2 261 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
HERPUD1-210ENST00000565966 IGKV3D-15A0A087WSY6 115 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 TRAPPC13A5PLN9 417 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 ZNF716A6NP11 495 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 FTCDNL1E5RQL4 147 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 GPR171O14626 319 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 CHP2O43745 196 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 RAMP1O60894 148 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 AHSA1O95433 338 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 ZNF682O95780 498 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 SERPINA1P01009 418 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 TCN1P20061 433 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 RPS5P46782 204 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 OR3A2P47893 321 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 SLC16A1P53985 500 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 FXNQ16595 210 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 PAQR6Q6TCH4 344 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 C5orf46Q6UWT4 87 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 TFAP2EQ6VUC0 442 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 LINC00114Q6XXX2 140 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 STAC2Q6ZMT1 411 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 WDR88Q6ZMY6 472 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 RINLQ6ZS11 566 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 VTCN1Q7Z7D3 282 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 P3H2Q8IVL5 708 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 MFSD8Q8NHS3 518 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 LZICQ8WZA0 190 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 FAM162AQ96A26 154 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 ZNF775Q96BV0 537 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 MED18Q9BUE0 208 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 TAPBPLQ9BX59 468 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 POLDIP3Q9BY77 421 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms