RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CST6Q15828 149 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PHKG1Q16816 387 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PNCKQ6P2M8 343 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ISLR2Q6UXK2 745 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 USP43Q70EL4 1123 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PIWIL3Q7Z3Z3 882 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SYVN1Q86TM6 617 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 AKAP14Q86UN6 197 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PTOV1Q86YD1 416 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 MARCH9Q86YJ5 346 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PLD3Q8IV08 490 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TCAIMQ8N3R3 496 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 OR52K2Q8NGK3 314 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ATL1Q8WXF7 558 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SMPDL3BQ92485 455 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 MYDGFQ969H8 173 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SLC38A4Q969I6 547 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CDKN2AIPNLQ96HQ2 116 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PYURFQ96I23 114 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ITCHQ96J02 903 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF583Q96ND8 569 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CCDC3Q9BQI4 270 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 MGME1Q9BQP7 344 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TRAF4Q9BUZ4 470 aaPredicted RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CCDC32Q9BV29 185 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 KATNB1Q9BVA0 655 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 NAA50Q9GZZ1 169 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ATP13A3Q9H7F0 1226 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SPASTQ9UBP0 616 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 OSGIN1Q9UJX0 560 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SATB2Q9UPW6 733 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TMED3Q9Y3Q3 217 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PEX16Q9Y5Y5 336 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 IGF2RP11717 2491 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 FAM172BPA6NC97 362 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 E9PQ18 207 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 J3QRK9 145 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 E2F3O00716 465 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 NADKO95544 446 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 HMBSP08397 361 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 VPREB1P12018 145 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 IGFBP5P24593 272 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DIO3P55073 304 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ELP6Q0PNE2 266 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 VWC2Q2TAL6 325 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 HNRNPA1L2Q32P51 320 aaKnown RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 GGTA1PQ4G0N0 100 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF789Q5FWF6 425 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 OTUD3Q5T2D3 398 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 NDUFAF5Q5TEU4 345 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 RBPMS2Q6ZRY4 209 aaKnown RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 IFNEQ86WN2 208 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 GCSAMQ8N6F7 178 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 POMGNT2Q8NAT1 580 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 MCOLN3Q8TDD5 553 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 NUDCD2Q8WVJ2 157 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TESCQ96BS2 214 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ALG14Q96F25 216 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 INTS14Q96SY0 518 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 SEPHS2Q99611 448 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 NTMT1Q9BV86 223 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DPY30Q9C005 99 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 OR2B2Q9GZK3 357 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 RDH14Q9HBH5 336 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 A4GALTQ9NPC4 353 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 C1orf109Q9NX04 203 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 PADI2Q9Y2J8 665 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ASH1LQ9NR48 2969 aaKnown RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TMEM131Q92545 1883 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 SAA2-SAA4A0A096LPE2 208 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 CXorf51AA0A1B0GTR3 108 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 PLSCR5A0PG75 271 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 NTN3O00634 580 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 MPZL2O60487 215 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 SIX3O95343 332 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 IGLV3-27P01718 113 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 KRT6AP02538 564 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 KRT6BP04259 564 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 HTR1AP08908 422 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TFPTP0C1Z6 253 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ITGA3P26006 1051 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 S100A5P33763 92 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 GNPDA1P46926 289 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 KRT6CP48668 564 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 FOXA1P55317 472 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 EMX1Q04741 257 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 AQP6Q13520 282 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TRA2AQ13595 282 aaKnown RBP eCLIP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 VEZF1Q14119 521 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF404Q494X3 552 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 FAM76BQ5HYJ3 339 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF324BQ6AW86 544 aaPredicted RBP3.76□□□□□ -1.81
LINC00561-201ENST00000565815 KDM4DQ6B0I6 523 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TBPL2Q6SJ96 375 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 GDPGP1Q6ZNW5 385 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 Q6ZSR9 355 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 FAM92BQ6ZTR7 304 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TPGS1Q6ZTW0 290 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 DET1Q7L5Y6 550 aa3.76□□□□□ -1.81
LINC00561-201ENST00000565815 TIPARPQ7Z3E1 657 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms