RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 IDO1P14902 403 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 DSCR9P59020 149 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 RAB35Q15286 201 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 CLEC2AQ6UVW9 174 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 CROCCP2Q86T23 111 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 HIPK1Q86Z02 1210 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 SPATA3Q8NHX4 192 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 MAELQ96JY0 434 aaKnown RBP20.9■□□□□ 0.94
NME3-206ENST00000564252 CALML5Q9NZT1 146 aa20.9■□□□□ 0.94
NME3-206ENST00000564252 ZNF443Q9Y2A4 671 aaPredicted RBP20.9■□□□□ 0.94
NME3-206ENST00000564252 TMEM120BA0PK00 339 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 FAM234BA2RU67 622 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 ELOA3DA6NLF2 546 aaPredicted RBP20.89■□□□□ 0.93
NME3-206ENST00000564252 SLC22A3O75751 556 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 BCHEP06276 602 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 TFPTP0C1Z6 253 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 P2RY4P51582 365 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 CRISP3P54108 245 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 BNIP2Q12982 314 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 ELOA3BQ3SY89 546 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 C1QTNF12Q5T7M4 302 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 RNF220Q5VTB9 566 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 NXNQ6DKJ4 435 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 WBP2NLQ6ICG8 309 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 AAED1Q7RTV5 226 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 POMGNT2Q8NAT1 580 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 ELOA3Q8NG57 546 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 SLC38A5Q8WUX1 472 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 BOD1Q96IK1 185 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 PIF1Q9H611 641 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 FKRPQ9H9S5 495 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 CHST2Q9Y4C5 530 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 ATP23Q9Y6H3 246 aa20.89■□□□□ 0.93
NME3-206ENST00000564252 ZCCHC18P0CG32 403 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 PRG2P13727 222 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 CRATP43155 626 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 DSTNP60981 165 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 GTDC1Q4AE62 458 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 SLC9B1Q4ZJI4 515 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 CADM2Q8N3J6 435 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 ZNF525Q8N782 197 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 TPT1P8Q9HAU6 139 aa20.88■□□□□ 0.93
NME3-206ENST00000564252 A8MV72 311 aaPredicted RBP20.87■□□□□ 0.93
NME3-206ENST00000564252 SLCO1B7G3V0H7 640 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 FRS3O43559 492 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 PRPS1P60891 318 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 COPZ1P61923 177 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 LOXL1Q08397 574 aaPredicted RBP20.87■□□□□ 0.93
NME3-206ENST00000564252 TMEM249Q2WGJ8 235 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 HIKESHIQ53FT3 197 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 RPS26P11Q5JNZ5 115 aaPredicted RBP20.87■□□□□ 0.93
NME3-206ENST00000564252 HMBOX1Q6NT76 420 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 MAVSQ7Z434 540 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 GPAT4Q86UL3 456 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 CLIP4Q8N3C7 705 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 MGARPQ8TDB4 240 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 VPS33AQ96AX1 596 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 AURKBQ96GD4 344 aaPredicted RBP20.87■□□□□ 0.93
NME3-206ENST00000564252 TNFRSF13CQ96RJ3 184 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 ADPRHL2Q9NX46 363 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 ZIM2Q9NZV7 527 aa20.87■□□□□ 0.93
NME3-206ENST00000564252 SVEP1Q4LDE5 3571 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 A8MVM7 634 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 ATP6V1G2-DDX39BF2Z307 99 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 NPIPB7O75200 414 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 ANP32DO95626 131 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 WNT11O96014 354 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 APOBEC3AP31941 199 aaPredicted RBP20.86■□□□□ 0.93
NME3-206ENST00000564252 LARS2Q15031 903 aaKnown RBP20.86■□□□□ 0.93
NME3-206ENST00000564252 C6orf52Q5T4I8 152 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 ATG16L1Q676U5 607 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 MSANTD1Q6ZTZ1 278 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 C3orf49Q96BT1 292 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 TMEM19Q96HH6 336 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 TAPBPLQ9BX59 468 aa20.86■□□□□ 0.93
NME3-206ENST00000564252 SDR39U1Q9NRG7 319 aaPredicted RBP20.86■□□□□ 0.93
NME3-206ENST00000564252 YLPM1P49750 1951 aaKnown RBP20.86■□□□□ 0.93
NME3-206ENST00000564252 TMEM229AB2RXF0 380 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 SLC25A16P16260 332 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 CDH2P19022 906 aaPredicted RBP20.85■□□□□ 0.93
NME3-206ENST00000564252 CHRNB3Q05901 458 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 ZSWIM7Q19AV6 140 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 C1orf140Q5VVS0 124 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 TMEM225Q6GV28 225 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 KLHL24Q6TFL4 600 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 CREB3L2Q70SY1 520 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 ABHD12BQ7Z5M8 362 aaPredicted RBP20.85■□□□□ 0.93
NME3-206ENST00000564252 SERPINA11Q86U17 422 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 OR9I1Q8NGQ6 314 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 ITCHQ96J02 903 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 OR52B2Q96RD2 323 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 SPATA9Q9BWV2 254 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 RMND5AQ9H871 391 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 MOKQ9UQ07 419 aa20.85■□□□□ 0.93
NME3-206ENST00000564252 A0A0G2JPF8 293 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 HNRNPCL2B2RXH8 293 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 HNRNPCL3B7ZW38 293 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 KLF11O14901 512 aa20.84■□□□□ 0.93
NME3-206ENST00000564252 HNRNPCL1O60812 293 aaKnown RBP20.84■□□□□ 0.93
NME3-206ENST00000564252 VAMP5O95183 116 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms