RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ASF1AQ9Y294 204 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 RPAP1Q9BWH6 1393 aaPredicted RBP3.71□□□□□ -1.82
LINC00557-201ENST00000563184 SCN2AQ99250 2005 aa3.71□□□□□ -1.82
LINC00557-201ENST00000563184 A0A0G2JLM5 398 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 E9PBE3 544 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 ZNF208O43345 1280 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 UGT1A9O60656 530 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 CCDC130P13994 396 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 GNA11P29992 359 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 SELENOTP62341 195 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 PARP15Q460N3 678 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 PMF1Q6P1K2 205 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 RGS9BPQ6ZS82 235 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 DHDDSQ86SQ9 333 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 ZNF679Q8IYX0 411 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 OR52H1Q8NGJ2 320 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 SCFD1Q8WVM8 642 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 CMTM7Q96FZ5 175 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 TIMD4Q96H15 378 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 ZNF414Q96IQ9 312 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 MRPL45Q9BRJ2 306 aaKnown RBP3.7□□□□□ -1.82
LINC00557-201ENST00000563184 MMP26Q9NRE1 261 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 ADAM28Q9UKQ2 775 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 CLEC4AQ9UMR7 237 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 NEU3Q9UQ49 428 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 RPL36Q9Y3U8 105 aaKnown RBP3.7□□□□□ -1.82
LINC00557-201ENST00000563184 PLEKHH1Q9ULM0 1364 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 ARHGAP21Q5T5U3 1957 aa3.7□□□□□ -1.82
LINC00557-201ENST00000563184 NSG1A0A0A6YYJ2 146 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 TCRBV9S1A1TA0A576 114 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 HIP1O00291 1037 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 POLR2DO15514 142 aaKnown RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 IL1BP01584 269 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 CCR1P32246 355 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 MAGEA8P43361 318 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 KPNA2P52292 529 aaKnown RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 PRPS1P60891 318 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 FGL1Q08830 312 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 ASPHQ12797 758 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 ARFRP1Q13795 201 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 OXA1LQ15070 435 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 PAGE3Q5JUK9 113 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 TIGD3Q6B0B8 471 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 CENPPQ6IPU0 288 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 CASC1Q6TDU7 716 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 TMIGD1Q6UXZ0 262 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 RNF165Q6ZSG1 346 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 SLC26A11Q86WA9 606 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 CCDC65Q8IXS2 484 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 ZCCHC7Q8N3Z6 543 aaKnown RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 PNKDQ8N490 385 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 FAM110BQ8TC76 370 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 FAM151AQ8WW52 585 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 RDH5Q92781 318 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 UCN3Q969E3 161 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 RBM14Q96PK6 669 aaKnown RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 MBOAT4Q96T53 435 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 P2RY13Q9BPV8 354 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 NT5C3AQ9H0P0 336 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 RNF167Q9H6Y7 350 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 SLC25A22Q9H936 323 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 NHEJ1Q9H9Q4 299 aaPredicted RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 NANOGQ9H9S0 305 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 POLE4Q9NR33 117 aa3.69□□□□□ -1.82
LINC00557-201ENST00000563184 THUMPD1Q9NXG2 353 aaKnown RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 MTRF1LQ9UGC7 380 aaKnown RBP3.69□□□□□ -1.82
LINC00557-201ENST00000563184 PINLYPA6NC86 204 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 HSD17B6O14756 317 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 MED7O43513 233 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 FAM189A1O60320 539 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 DBTP11182 482 aaKnown RBP3.68□□□□□ -1.82
LINC00557-201ENST00000563184 MGMTP16455 207 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 ATP1B3P54709 279 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 AIF1P55008 147 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 TAS2R19P59542 299 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 TNFRSF17Q02223 184 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 LRRC23Q53EV4 343 aaPredicted RBP3.68□□□□□ -1.82
LINC00557-201ENST00000563184 SAMD4BQ5PRF9 694 aaKnown RBP3.68□□□□□ -1.82
LINC00557-201ENST00000563184 IGFL2Q6UWQ7 119 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 TRIM69Q86WT6 500 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 RALGPS2Q86X27 583 aaPredicted RBP3.68□□□□□ -1.82
LINC00557-201ENST00000563184 LRRC75A-AS1Q8N1F1 130 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 MAGEE2Q8TD90 523 aaPredicted RBP3.68□□□□□ -1.82
LINC00557-201ENST00000563184 UFD1Q92890 307 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 KCNA7Q96RP8 456 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 NAT9Q9BTE0 207 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 GON7Q9BXV9 100 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 TRAF3IP3Q9Y228 551 aa3.68□□□□□ -1.82
LINC00557-201ENST00000563184 ATAD2BQ9ULI0 1458 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 IQANK1A0A1B0GTG1 560 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 A8MXQ7 604 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 CXCL11O14625 94 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 SURF6O75683 361 aaKnown RBP3.67□□□□□ -1.82
LINC00557-201ENST00000563184 OXSR1O95747 527 aaPredicted RBP3.67□□□□□ -1.82
LINC00557-201ENST00000563184 P04436 131 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 NR2C1P13056 603 aa3.67□□□□□ -1.82
LINC00557-201ENST00000563184 MDKP21741 143 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms