RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CACNG6Q9BXT2 260 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 PIF1Q9H611 641 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 SLC17A5Q9NRA2 495 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 CBLN4Q9NTU7 201 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 THUMPD1Q9NXG2 353 aaKnown RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 NKIRAS1Q9NYS0 192 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 ZNF232Q9UNY5 417 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 AQP7P3A6NL99 342 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 A8MVM7 634 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 UBDO15205 165 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 SSX4O60224 188 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 MPGP29372 298 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 POLR2JP52435 117 aaKnown RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 IRX1P78414 480 aaPredicted RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 BNIP2Q12982 314 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 GTDC1Q4AE62 458 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 B3GLCTQ6Y288 498 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 AAED1Q7RTV5 226 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 FBXL14Q8N1E6 418 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 OR9I1Q8NGQ6 314 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 VPS33AQ96AX1 596 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 AURKBQ96GD4 344 aaPredicted RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 ZNF385AQ96PM9 386 aaKnown RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 ZNF443Q9Y2A4 671 aaPredicted RBP14.22□□□□□ -0.13
SNX1-213ENST00000561026 AMDHD2Q9Y303 409 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 CHST2Q9Y4C5 530 aa14.22□□□□□ -0.13
SNX1-213ENST00000561026 A0A0G2JPF8 293 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 HNRNPCL2B2RXH8 293 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 HNRNPCL3B7ZW38 293 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 KLF11O14901 512 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 HNRNPCL1O60812 293 aaKnown RBP14.21□□□□□ -0.14
SNX1-213ENST00000561026 TP53P04637 393 aaPredicted RBP14.21□□□□□ -0.14
SNX1-213ENST00000561026 HNRNPCL4P0DMR1 293 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 PRG2P13727 222 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 FABP6P51161 128 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 PRPS1P60891 318 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 SLC25A3Q00325 362 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 RPS26P11Q5JNZ5 115 aaPredicted RBP14.21□□□□□ -0.14
SNX1-213ENST00000561026 C6orf10Q5SRN2 563 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 TMEM225Q6GV28 225 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 ZNF544Q6NX49 715 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 GPAT4Q86UL3 456 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 POMGNT2Q8NAT1 580 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 OR10H5Q8NGA6 315 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 TLCD1Q96CP7 247 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 TMEM19Q96HH6 336 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 BOD1Q96IK1 185 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 RHNO1Q9BSD3 238 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 SPATA9Q9BWV2 254 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 TAPBPLQ9BX59 468 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 ARMC7Q9H6L4 198 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 ADPRHL2Q9NX46 363 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 COL6A5A8TX70 2615 aa14.21□□□□□ -0.14
SNX1-213ENST00000561026 FAM234BA2RU67 622 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 TMEM247A6NEH6 219 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 TLX2O43763 284 aaPredicted RBP14.2□□□□□ -0.14
SNX1-213ENST00000561026 NPIPB7O75200 414 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 NCF2P19878 526 aaPredicted RBP14.2□□□□□ -0.14
SNX1-213ENST00000561026 P2RY4P51582 365 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 NUDT6P53370 316 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 RAB35Q15286 201 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 RGNQ15493 299 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 SERPINA11Q86U17 422 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 MIER2Q8N344 545 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 GTF2H4Q92759 462 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 FKRPQ9H9S5 495 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 CACYBPQ9HB71 228 aaKnown RBP14.2□□□□□ -0.14
SNX1-213ENST00000561026 TMBIM4Q9HC24 238 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 BCL2L10Q9HD36 194 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 IFT52Q9Y366 437 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 PCDHB14Q9Y5E9 798 aa14.2□□□□□ -0.14
SNX1-213ENST00000561026 FBN1P35555 2871 aaKnown RBP14.2□□□□□ -0.14
SNX1-213ENST00000561026 CR1P17927 2039 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 IGHV4-30-2A0A087WSY4 118 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 A0A096LPI6 279 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 CD5LO43866 347 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 VAMP5O95183 116 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 NUDT7P0C024 238 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 CDH2P19022 906 aaPredicted RBP14.19□□□□□ -0.14
SNX1-213ENST00000561026 DSCR9P59020 149 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 CREB3L2Q70SY1 520 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 ABHD12BQ7Z5M8 362 aaPredicted RBP14.19□□□□□ -0.14
SNX1-213ENST00000561026 C3orf49Q96BT1 292 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 PAIP1Q9H074 479 aaKnown RBP14.19□□□□□ -0.14
SNX1-213ENST00000561026 HEATR1Q9H583 2144 aaKnown RBP14.19□□□□□ -0.14
SNX1-213ENST00000561026 A4GALTQ9NPC4 353 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 ATP23Q9Y6H3 246 aa14.19□□□□□ -0.14
SNX1-213ENST00000561026 TMEM229AB2RXF0 380 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 H7C417 338 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 CLIC1O00299 241 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 FRS3O43559 492 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 KRT33AO76009 404 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 WNT11O96014 354 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 BMP2P12643 396 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 HIKESHIQ53FT3 197 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 ZNF311Q5JNZ3 666 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 PRAMEF8Q5VWM4 474 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 PRAMEF7Q5VXH5 474 aa14.18□□□□□ -0.14
SNX1-213ENST00000561026 SLC2A7Q6PXP3 512 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms