RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR7A5Q15622 319 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 EXOC3L2Q2M3D2 409 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 ELOA3BQ3SY89 546 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 ELOA3Q8NG57 546 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 MFSD8Q8NHS3 518 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 TAAR8Q969N4 342 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 SLC47A1Q96FL8 570 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 LURAP1Q96LR2 239 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 NAA11Q9BSU3 229 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 TESMINQ9Y4I5 508 aa13.54□□□□□ -0.24
SNRPA1-213ENST00000560856 CSMD1Q96PZ7 3565 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 SH3D21A4FU49 640 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 AQP7P3A6NL99 342 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 A6NNC1 897 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 FAM107AO95990 144 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 TNFRSF1BP20333 461 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 PSMB1P20618 241 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 LTBQ06643 244 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 ENTPD8Q5MY95 495 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 OTUD3Q5T2D3 398 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 ZNF613Q6PF04 617 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 WDR88Q6ZMY6 472 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 RANBP3LQ86VV4 465 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 SLC26A7Q8TE54 656 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 RASSF5Q8WWW0 418 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 LRRC37BQ96QE4 947 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 RASSF1Q9NS23 344 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 ADAM21Q9UKJ8 722 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 FLVCR1Q9Y5Y0 555 aa13.53□□□□□ -0.24
SNRPA1-213ENST00000560856 SIAH2O43255 324 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 DCTN3O75935 186 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 AHSA1O95433 338 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 THBDP07204 575 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 NCALDP61601 193 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 ANKRD34AQ69YU3 496 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 C5orf46Q6UWT4 87 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 STK32CQ86UX6 486 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 CARM1Q86X55 608 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 FITM2Q8N6M3 262 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 ADAMTS16Q8TE57 1224 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 SF3B5Q9BWJ5 86 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 TAPBPLQ9BX59 468 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 ALG2Q9H553 416 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 ADPRHL2Q9NX46 363 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 EMC3Q9P0I2 261 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 NDRG3Q9UGV2 375 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 BAG5Q9UL15 447 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 CCDC168Q8NDH2 2452 aa13.52□□□□□ -0.25
SNRPA1-213ENST00000560856 CSMD2Q7Z408 3487 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 ROS1P08922 2347 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 TRAV36DV7A0A075B6V5 113 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 CPSF4LA6NMK7 179 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 CXCR6O00574 342 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 GPR171O14626 319 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 CHP2O43745 196 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 IFNA14P01570 189 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 BGLAPP02818 100 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 SELENOWP63302 87 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 FAM69AQ5T7M9 428 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 Q6ZT83 130 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 CXorf67Q86X51 503 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 OR9K2Q8NGE7 335 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 OR6S1Q8NH40 331 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 PROX1Q92786 737 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 PRSS27Q9BQR3 290 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF426Q9BUY5 554 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 OR10A4Q9H209 315 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 SEC14L4Q9UDX3 406 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 TAGLN3Q9UI15 199 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC9A8Q9Y2E8 581 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 GPR52Q9Y2T5 361 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 NOSIPQ9Y314 301 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 SH3GLB1Q9Y371 365 aa13.51□□□□□ -0.25
SNRPA1-213ENST00000560856 A0A1W2PPR1 153 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 TRAPPC13A5PLN9 417 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 DEFB108AA8MXU0 73 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 NDUFAB1O14561 156 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 OR2T1O43869 369 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 CNOT4O95628 575 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 ADAP00813 363 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 HRGP04196 525 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 COX5AP20674 150 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 CRYGSP22914 178 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 LOXP28300 417 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 OR1E2P47887 323 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 KRT72Q14CN4 511 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms