RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 GCNT6Q5T4J0 391 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 SLC22A25Q6T423 547 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 AAED1Q7RTV5 226 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 FBXL14Q8N1E6 418 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 KBTBD8Q8NFY9 601 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 OR9K2Q8NGE7 335 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 STON2Q8WXE9 905 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 GTF2H4Q92759 462 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 VPS33AQ96AX1 596 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 ZNF607Q96SK3 696 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 SIKE1Q9BRV8 207 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 SLCO5A1Q9H2Y9 848 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 PCDHB14Q9Y5E9 798 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 USF3Q68DE3 2245 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 DPRXA6NFQ7 191 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 ELOA3DA6NLF2 546 aaPredicted RBP12.4□□□□□ -0.42
TPM1-223ENST00000560445 ZNF587BE7ETH6 402 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 ADAM11O75078 769 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 SERPINB7O75635 380 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 TP53P04637 393 aaPredicted RBP12.4□□□□□ -0.42
TPM1-223ENST00000560445 DANCRP0C864 163 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 PNMTP11086 282 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 IMPDH2P12268 514 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
TPM1-223ENST00000560445 DSCR9P59020 149 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 CHRNB3Q05901 458 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 CEACAM7Q14002 265 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 SQLEQ14534 574 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 GABRA6Q16445 453 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 CLEC12BQ2HXU8 276 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 ELOA3BQ3SY89 546 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 LRIF1Q5T3J3 769 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 REEP3Q6NUK4 255 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 ZNF544Q6NX49 715 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 MAVSQ7Z434 540 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 DTX2Q86UW9 622 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 CCDC103Q8IW40 242 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 ELOA3Q8NG57 546 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 OR9I1Q8NGQ6 314 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 OR52N5Q8NH56 324 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 MFSD8Q8NHS3 518 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 DNAJA4Q8WW22 397 aaPredicted RBP12.4□□□□□ -0.42
TPM1-223ENST00000560445 SPDL1Q96EA4 605 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 DHRS9Q9BPW9 319 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 KCNS3Q9BQ31 491 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 INTS9Q9NV88 658 aaKnown RBP12.4□□□□□ -0.42
TPM1-223ENST00000560445 RLIMQ9NVW2 624 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 ADPRHL2Q9NX46 363 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
TPM1-223ENST00000560445 SLC25A15Q9Y619 301 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 GMEB1Q9Y692 573 aa12.4□□□□□ -0.42
TPM1-223ENST00000560445 TRIM64A6NGJ6 449 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 TRIM64BA6NI03 449 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 NR5A2O00482 541 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 SMAD7O15105 426 aaKnown RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 FRS3O43559 492 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 LY6G6DO95868 133 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 GKN3PP0CG01 181 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 SLC6A2P23975 617 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 CD40P25942 277 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 ACAA2P42765 397 aaKnown RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 IDH3AP50213 366 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 ZNF83P51522 516 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 PLAURQ03405 335 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 NET1Q7Z628 596 aaPredicted RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 SLC38A4Q969I6 547 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 AURKBQ96GD4 344 aaPredicted RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 EPYCQ99645 322 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 TRAF4Q9BUZ4 470 aaPredicted RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 TESQ9UGI8 421 aaKnown RBP12.39□□□□□ -0.43
TPM1-223ENST00000560445 RCE1Q9Y256 329 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 CADP27708 2225 aa12.39□□□□□ -0.43
TPM1-223ENST00000560445 TLN2Q9Y4G6 2542 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 ZC3H12DA2A288 527 aaKnown RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 M0R1B8 84 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 PDLIM1O00151 329 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 AKR7A3O95154 331 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 SOD3P08294 240 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 ITGA5P08648 1049 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 CSF3P09919 207 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 HOXB1P14653 301 aaPredicted RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 ZNF43P17038 809 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 AQP5P55064 265 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 UBE2NP61088 152 aaKnown RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 CDK6Q00534 326 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 MAPK11Q15759 364 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms