RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 S100A5P33763 92 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 FOLR3P41439 243 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 PNLIPRP2P54317 469 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 FHL1Q13642 323 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 LHFPL3Q86UP9 236 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 VASH2Q86V25 355 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 ACBD7Q8N6N7 88 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 SLC37A3Q8NCC5 494 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 ZNF485Q8NCK3 441 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 OR51G2Q8NGK0 314 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 OR2Y1Q8NGV0 311 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 TCFL5Q9UL49 500 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 CAB39Q9Y376 341 aaPredicted RBP16.21■□□□□ 0.19
SNX1-208ENST00000559844 PEX16Q9Y5Y5 336 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 AKAP8O43823 692 aaKnown RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 ICOSLGO75144 302 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 HEXBP07686 556 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 CCR4P51679 360 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 CLN3Q13286 438 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 KLHL12Q53G59 568 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 TMPRSS11AQ6ZMR5 421 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 ATG4DQ86TL0 474 aaPredicted RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 PRR22Q8IZ63 422 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 SIRT6Q8N6T7 355 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 C6orf62Q9GZU0 229 aaPredicted RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 TAF4O00268 1085 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 OIP5O43482 229 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 EIF4E2O60573 245 aaKnown RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 LIFP15018 202 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 POU4F2Q12837 409 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 FAAH2Q6GMR7 532 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 APOOLQ6UXV4 268 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 DPY19L2P2Q6ZN68 376 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 ZNF441Q8N8Z8 693 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 ZNF248Q8NDW4 579 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 KCNE4Q8WWG9 221 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 TM9SF4Q92544 642 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 PTP4A1Q93096 173 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 OMA1Q96E52 524 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 ERMAPQ96PL5 475 aaPredicted RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 ZNF649Q9BS31 505 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 MED20Q9H944 212 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 CRNNQ9UBG3 495 aaPredicted RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 DKK4Q9UBT3 224 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 IL17BQ9UHF5 180 aa16.2■□□□□ 0.18
SNX1-208ENST00000559844 MRPS18BQ9Y676 258 aaKnown RBP16.2■□□□□ 0.18
SNX1-208ENST00000559844 A0A075B6Q4 140 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 WWP2O00308 870 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 UMODP07911 640 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 CD40LGP29965 261 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 GABRA5P31644 462 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 EMP2P54851 167 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 PRPS1P60891 318 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 RPS7P62081 194 aaKnown RBP16.19■□□□□ 0.18
SNX1-208ENST00000559844 BDH1Q02338 343 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 CRMP1Q14194 572 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 RGS21Q2M5E4 152 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 ZNF362Q5T0B9 420 aaPredicted RBP16.19■□□□□ 0.18
SNX1-208ENST00000559844 CBLN3Q6UW01 205 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 Q6ZNX1 250 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 LANCL3Q6ZV70 420 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 ZNF563Q8TA94 476 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 SNIP1Q8TAD8 396 aaKnown RBP16.19■□□□□ 0.18
SNX1-208ENST00000559844 LIPHQ8WWY8 451 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 TP53INP1Q96A56 240 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 TEAD3Q99594 435 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 HAO2Q9NYQ3 351 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 CHRNA9Q9UGM1 479 aa16.19■□□□□ 0.18
SNX1-208ENST00000559844 CCDC182A6NF36 153 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 ALG1L2C9J202 215 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 SLC2A5P22732 501 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 PPP5CP53041 499 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 SRSF6Q13247 344 aaKnown RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 ZNF322Q6U7Q0 402 aaPredicted RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 NUP54Q7Z3B4 507 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 ANKRD37Q7Z713 158 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 OR5M3Q8NGP4 307 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 METTL21AQ8WXB1 218 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 KISS1RQ969F8 398 aaPredicted RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 COQ7Q99807 217 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 HCAR1Q9BXC0 346 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 TBL1XR1Q9BZK7 514 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 FAM117AQ9C073 453 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 NUAK2Q9H093 628 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 OR51V1Q9H2C8 321 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 TXNL4BQ9NX01 149 aaKnown RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 SF3B6Q9Y3B4 125 aaKnown RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 IGKV1D-42A0A075B6H8 117 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 SAGE2PA6NJ88 616 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 C12orf71A8MTZ7 269 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 NDUFB5O43674 189 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 IDH3BO43837 385 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 ALOX12BO75342 701 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 ABCD3P28288 659 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 RPL4P36578 427 aaKnown RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 RORCP51449 518 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 NRG3P56975 720 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 RPS4XP62701 263 aaKnown RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 SPRYD4Q8WW59 207 aaPredicted RBP16.18■□□□□ 0.18
SNX1-208ENST00000559844 C1GALT1C1Q96EU7 318 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms