RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 OR10K1Q8NGX5 313 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 SLC22A18Q96BI1 424 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 KCTD12Q96CX2 325 aaKnown RBP6.61□□□□□ -1.35
USP3-210ENST00000559192 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 LRRC46Q96FV0 321 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 PDXPQ96GD0 296 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 LIN7BQ9HAP6 207 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 NOX4Q9NPH5 578 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 PTTG3PQ9NZH4 202 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 TRBV5-3A0A0A0MS03 114 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 RFXAPO00287 272 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 CSF1P09603 554 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 POU3F3P20264 500 aaPredicted RBP6.61□□□□□ -1.35
USP3-210ENST00000559192 GLP1RP43220 463 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 ZNF136P52737 540 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 FOXK2Q01167 660 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 DHCR24Q15392 516 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 GLB1L2Q8IW92 636 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 NANPQ8TBE9 248 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 CMKLR1Q99788 373 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 ORAI3Q9BRQ5 295 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 MED18Q9BUE0 208 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 SLC46A2Q9BY10 475 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 NRIP3Q9NQ35 241 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 ACSS1Q9NUB1 689 aaPredicted RBP6.61□□□□□ -1.35
USP3-210ENST00000559192 ASB6Q9NWX5 421 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 ATXN7L1Q9ULK2 861 aaPredicted RBP6.61□□□□□ -1.35
USP3-210ENST00000559192 EXO1Q9UQ84 846 aaKnown RBP6.61□□□□□ -1.35
USP3-210ENST00000559192 ADAM18Q9Y3Q7 739 aa6.61□□□□□ -1.35
USP3-210ENST00000559192 NPC1O15118 1278 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 LALBAP00709 142 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 F11P03951 625 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 PTBP1P26599 531 aaKnown RBP eCLIP6.6□□□□□ -1.354e-8■■■■■ 64.1
USP3-210ENST00000559192 RAB28P51157 221 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 RAP2BP61225 183 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 ERVK-21P61565 698 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 HERV-K104P61576 105 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CRMP1Q14194 572 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 KIAA1211LQ6NV74 962 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 C17orf107Q6ZR85 190 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 TMPRSS9Q7Z410 1059 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 TMEM150AQ86TG1 271 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 SIRT6Q8N6T7 355 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 WDFY2Q96P53 400 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 TNFRSF13CQ96RJ3 184 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 MICU1Q9BPX6 476 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 HINT3Q9NQE9 182 aaKnown RBP6.6□□□□□ -1.35
USP3-210ENST00000559192 ARRDC5A6NEK1 342 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 J3QR89 54 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 NDUFB2O95178 105 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 RAB3DO95716 219 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CHRM4P08173 479 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 UBBP0CG47 229 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 UBCP0CG48 685 aaKnown RBP6.6□□□□□ -1.35
USP3-210ENST00000559192 HMGA1P17096 107 aaKnown RBP6.6□□□□□ -1.35
USP3-210ENST00000559192 TYRP1P17643 537 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 HIST1H1TP22492 207 aaPredicted RBP6.6□□□□□ -1.35
USP3-210ENST00000559192 FPR3P25089 353 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 PRSS3P35030 304 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 RAB33AQ14088 237 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 DUSP6Q16828 381 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.6□□□□□ -1.35
USP3-210ENST00000559192 ZNF546Q86UE3 836 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CD163Q86VB7 1156 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 KLHDC8BQ8IXV7 354 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 METTL21AQ8WXB1 218 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 TRMT2BQ96GJ1 504 aaKnown RBP6.6□□□□□ -1.35
USP3-210ENST00000559192 TMEM41AQ96HV5 264 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 PDCD1LG2Q9BQ51 273 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 UBQLN3Q9H347 655 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 INPP5EQ9NRR6 644 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 MAN2C1Q9NTJ4 1040 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 MED17Q9NVC6 651 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CPED1A4D0V7 1026 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 H3BUI4 141 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 SURF4O15260 269 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 SELENOFO60613 162 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 LGI1O95970 557 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 IGHA2P01877 340 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 S100A11P31949 105 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 GPR143P51810 404 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 HTD2P86397 168 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CNKSR3Q6P9H4 555 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 TSSK4Q6SA08 328 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 C17orf99Q6UX52 265 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 UNQ6126/PRO20091Q6UXV3 157 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 SSX7Q7RTT5 188 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CPXM2Q8N436 756 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 ZNF439Q8NDP4 499 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 PXT1Q8NFP0 134 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 OR52E1Q8NGJ3 308 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 OR52I2Q8NH67 350 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 LRIG1Q96JA1 1093 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 CAMK2AQ9UQM7 478 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 H7C1C5 153 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 SCO2O43819 266 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 DOK2O60496 412 aa6.6□□□□□ -1.35
USP3-210ENST00000559192 SDC3O75056 442 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms