RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 PRPF19Q9UMS4 504 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-208ENST00000558954 TRAV36DV7A0A075B6V5 113 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF724A8MTY0 619 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 ARPC2O15144 300 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 OR2T1O43869 369 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 OR5F1O95221 314 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 CGAP01215 116 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 YES1P07947 543 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 COX6B1P14854 86 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 IGFBP2P18065 325 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 UQCRC1P31930 480 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 PEX19P40855 299 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 SLC16A1P53985 500 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 OTUD3Q5T2D3 398 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 SP5Q6BEB4 398 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 STK32CQ86UX6 486 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 TSPYL5Q86VY4 417 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 KTI12Q96EK9 354 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 SLC41A3Q96GZ6 507 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 PRRC1Q96M27 445 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 PTDSS2Q9BVG9 487 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 RBM24Q9BX46 236 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 ENKD1Q9H0I2 346 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 DCAF13Q9NV06 445 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 GALNT8Q9NY28 637 aa16.81■□□□□ 0.28
RABGGTA-208ENST00000558954 IGKV3D-15A0A087WSY6 115 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 AQP7P3A6NL99 342 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF716A6NP11 495 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 A8MXE2 369 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 GPR171O14626 319 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 AKR7A3O95154 331 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 THRBP10828 461 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 IFNA8P32881 189 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 MFSD13AQ14CX5 517 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 LINC00114Q6XXX2 140 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 KIF18BQ86Y91 864 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 CCDC103Q8IW40 242 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 ACBD4Q8NC06 268 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 OR6S1Q8NH40 331 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 NSMCE2Q96MF7 247 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF300Q96RE9 604 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 OPN3Q9H1Y3 402 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 MUC13Q9H3R2 512 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 C12orf49Q9H741 205 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 TAS2R1Q9NYW7 299 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 C6orf203Q9P0P8 240 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 ING1Q9UK53 422 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 CENPEQ02224 2701 aa16.8■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF814B7Z6K7 855 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 FTCDNL1E5RQL4 147 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 FZD7O75084 574 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 LYPD3O95274 346 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 THY1P04216 161 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 PTNP21246 168 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 MSX2P35548 267 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 SORDQ00796 357 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 DNAL1Q4LDG9 190 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 HIST2H2BCQ6DN03 193 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 TTC33Q6PID6 262 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 WDR88Q6ZMY6 472 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 MEX3BQ6ZN04 569 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 GDF7Q7Z4P5 450 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 P3H2Q8IVL5 708 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 TMEM99Q8N816 258 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 TAAR8Q969N4 342 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 SLC25A36Q96CQ1 311 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 SPOCK3Q9BQ16 436 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF426Q9BUY5 554 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 SLC19A3Q9BZV2 496 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 SLC24A3Q9HC58 644 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 PLSCR4Q9NRQ2 329 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 RIMS3Q9UJD0 308 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 CACNA1DQ01668 2161 aa16.79■□□□□ 0.28
RABGGTA-208ENST00000558954 SETXQ7Z333 2677 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 HNRNPRO43390 633 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 RAMP1O60894 148 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 VAMP5O95183 116 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 PCYT1AP49585 367 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 ST3GAL3Q11203 375 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 PIN1Q13526 163 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 TFAP2EQ6VUC0 442 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 GALNT5Q7Z7M9 940 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 DMRTC2Q8IXT2 367 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 OFCC1Q8IZS5 231 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF610Q8N9Z0 462 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 SF3B5Q9BWJ5 86 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 AMBRA1Q9C0C7 1298 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 FANCFQ9NPI8 374 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 ELOVL5Q9NYP7 299 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 CORINQ9Y5Q5 1042 aa16.78■□□□□ 0.28
RABGGTA-208ENST00000558954 GYG2O15488 501 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 PDE5AO76074 875 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 MT-ATP6P00846 226 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 CD79BP40259 229 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 RBM34P42696 430 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 SLC17A1Q14916 467 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 TMEM225Q6GV28 225 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 ZNF474Q6S9Z5 364 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 BEND4Q6ZU67 534 aa16.77■□□□□ 0.28
RABGGTA-208ENST00000558954 NUFIP2Q7Z417 695 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms