RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 PLAURQ03405 335 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 RBBP4Q09028 425 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 RUNDC3AQ59EK9 446 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 TFAP2EQ6VUC0 442 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 HMGN2P46Q86SG4 172 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 MSRB3Q8IXL7 192 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 MAPK1IP1LQ8NDC0 245 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 PIGXQ8TBF5 258 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 RADILQ96JH8 1075 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 ADAD1Q96M93 576 aaKnown RBP13.5□□□□□ -0.25
RPL28-206ENST00000558752 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 EMC3Q9P0I2 261 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.5□□□□□ -0.25
RPL28-206ENST00000558752 MAGED1Q9Y5V3 778 aaPredicted RBP13.5□□□□□ -0.25
RPL28-206ENST00000558752 ABCA1O95477 2261 aa13.5□□□□□ -0.25
RPL28-206ENST00000558752 IGKV3D-15A0A087WSY6 115 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 PRORSD1PA6NEY8 169 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 AP3D1O14617 1153 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 ADAM11O75078 769 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 SERPINB7O75635 380 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 ADAP00813 363 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 NPPAP01160 153 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 VIMP08670 466 aaKnown RBP13.49□□□□□ -0.25
RPL28-206ENST00000558752 NUDT7P0C024 238 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 ACVR1BP36896 505 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 ARFIP2P53365 341 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 H3F3AP84243 136 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 FAPQ12884 760 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 ZNF836Q6ZNA1 936 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
RPL28-206ENST00000558752 GALNT5Q7Z7M9 940 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 P2RY8Q86VZ1 359 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 SLC30A8Q8IWU4 369 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 LILRB1Q8NHL6 650 aaPredicted RBP13.49□□□□□ -0.25
RPL28-206ENST00000558752 THOC1Q96FV9 657 aaKnown RBP13.49□□□□□ -0.25
RPL28-206ENST00000558752 SH3GL1Q99961 368 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 PSD2Q9BQI7 771 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 PIF1Q9H611 641 aa13.49□□□□□ -0.25
RPL28-206ENST00000558752 CISD1Q9NZ45 108 aaKnown RBP13.49□□□□□ -0.25
RPL28-206ENST00000558752 CUBNO60494 3623 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 SMAD9O15198 467 aaKnown RBP13.48□□□□□ -0.25
RPL28-206ENST00000558752 OR3A2P47893 321 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 SLC16A1P53985 500 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 OR2B6P58173 313 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 BSPH1Q075Z2 132 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 CYLC2Q14093 348 aaPredicted RBP13.48□□□□□ -0.25
RPL28-206ENST00000558752 PPA1Q15181 289 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 DHRS4L2Q6PKH6 230 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 Q6ZT83 130 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 NUFIP2Q7Z417 695 aaKnown RBP13.48□□□□□ -0.25
RPL28-206ENST00000558752 HIPK4Q8NE63 616 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 MAL2Q969L2 176 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 ARL5BQ96KC2 179 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 ANKRD27Q96NW4 1050 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 CGREF1Q99674 301 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 TMEM120AQ9BXJ8 343 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 C12orf10Q9HB07 376 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 PARPBPQ9NWS1 579 aa13.48□□□□□ -0.25
RPL28-206ENST00000558752 ING1Q9UK53 422 aaPredicted RBP13.48□□□□□ -0.25
RPL28-206ENST00000558752 A8MVM7 634 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 IGHV4-39P01824 125 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 GPIP06744 558 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 GKN3PP0CG01 181 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 SCARB2Q14108 478 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 MAPRE2Q15555 327 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 COQ5Q5HYK3 327 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 RPS26P11Q5JNZ5 115 aaPredicted RBP13.47□□□□□ -0.25
RPL28-206ENST00000558752 PAQR6Q6TCH4 344 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 DHDDSQ86SQ9 333 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 C11orf65Q8NCR3 313 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 KBTBD8Q8NFY9 601 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 NFKBIDQ8NI38 313 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 STK35Q8TDR2 534 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 CPPED1Q9BRF8 314 aaPredicted RBP13.47□□□□□ -0.25
RPL28-206ENST00000558752 TRAF4Q9BUZ4 470 aaPredicted RBP13.47□□□□□ -0.25
RPL28-206ENST00000558752 TRIM2Q9C040 744 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 MGAT4BQ9UQ53 548 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 CHST2Q9Y4C5 530 aa13.47□□□□□ -0.25
RPL28-206ENST00000558752 IGHV3-15A0A0B4J1V0 119 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 TMEM72A0PK05 275 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 SLC22A2O15244 555 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 VAMP5O95183 116 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 BMP4P12644 408 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 CCNA2P20248 432 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 NUDT6P53370 316 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 CDH11P55287 796 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 NFYCQ13952 458 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 TSC22D1Q15714 1073 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 STK11Q15831 433 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 ADRM1Q16186 407 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 PGGHGQ32M88 737 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 TIMM23BQ5SRD1 257 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 ABLIM2Q6H8Q1 611 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 CLEC2AQ6UVW9 174 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 C5orf46Q6UWT4 87 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 DNM1P46Q6ZS02 220 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms