RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TMBIM4Q9HC24 238 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 SLC17A5Q9NRA2 495 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 FAIMQ9NVQ4 179 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 CALML5Q9NZT1 146 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 ZIM2Q9NZV7 527 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 UPB1Q9UBR1 384 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 DCTN4Q9UJW0 460 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 SLC9A8Q9Y2E8 581 aa10.1□□□□□ -0.79
CASC4-205ENST00000558735 A0A0G2JPF8 293 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 HNRNPCL2B2RXH8 293 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 HNRNPCL3B7ZW38 293 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 M0R1B8 84 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 UBDO15205 165 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 SSX4O60224 188 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 HNRNPCL1O60812 293 aaKnown RBP10.09□□□□□ -0.79
CASC4-205ENST00000558735 ANP32DO95626 131 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 BCHEP06276 602 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 GPIP06744 558 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 NUDT7P0C024 238 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 FAM157CP0CG43 387 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 HNRNPCL4P0DMR1 293 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 P2RY4P51582 365 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 POLR2JP52435 117 aaKnown RBP10.09□□□□□ -0.79
CASC4-205ENST00000558735 CRISP3P54108 245 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 DSTNP60981 165 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 SLC25A3Q00325 362 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 OR7A5Q15622 319 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 CHRFAM7AQ494W8 412 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
CASC4-205ENST00000558735 TMEM225Q6GV28 225 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 WBP2NLQ6ICG8 309 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 C11orf71Q6IPW1 123 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 KLHL17Q6TDP4 642 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 EPGNQ6UW88 154 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 B3GLCTQ6Y288 498 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 MSANTD1Q6ZTZ1 278 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 CADM2Q8N3J6 435 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 OR9K2Q8NGE7 335 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 GTF2H4Q92759 462 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 TMEM45BQ96B21 275 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 SF3B5Q9BWJ5 86 aaKnown RBP10.09□□□□□ -0.79
CASC4-205ENST00000558735 PAIP1Q9H074 479 aaKnown RBP10.09□□□□□ -0.79
CASC4-205ENST00000558735 RMND5AQ9H871 391 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 CBLN4Q9NTU7 201 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 P2RX2Q9UBL9 471 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 ZNF232Q9UNY5 417 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 ZNF443Q9Y2A4 671 aaPredicted RBP10.09□□□□□ -0.79
CASC4-205ENST00000558735 PCDHB14Q9Y5E9 798 aa10.09□□□□□ -0.79
CASC4-205ENST00000558735 AQP7P3A6NL99 342 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 A8MVM7 634 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 CLIC1O00299 241 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 KLF11O14901 512 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 NPIPB7O75200 414 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 UQCRBP14927 111 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 MPGP29372 298 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 FABP6P51161 128 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 LARS2Q15031 903 aaKnown RBP10.08□□□□□ -0.8
CASC4-205ENST00000558735 RGNQ15493 299 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 LIN52Q52LA3 116 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 BEND6Q5SZJ8 279 aaPredicted RBP10.08□□□□□ -0.8
CASC4-205ENST00000558735 RNF220Q5VTB9 566 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 CREB3L2Q70SY1 520 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 AAED1Q7RTV5 226 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 SERPINA11Q86U17 422 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 MUC15Q8N387 334 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 C1orf162Q8NEQ5 155 aaPredicted RBP10.08□□□□□ -0.8
CASC4-205ENST00000558735 OR10H5Q8NGA6 315 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 TMEM19Q96HH6 336 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 BOD1Q96IK1 185 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 HS6ST2Q96MM7 605 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 SPATA9Q9BWV2 254 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 CACNG6Q9BXT2 260 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 HEATR1Q9H583 2144 aaKnown RBP10.08□□□□□ -0.8
CASC4-205ENST00000558735 PIF1Q9H611 641 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 BARX1Q9HBU1 254 aaPredicted RBP10.08□□□□□ -0.8
CASC4-205ENST00000558735 TMEM160Q9NX00 188 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 ADPRHL2Q9NX46 363 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 NKIRAS1Q9NYS0 192 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 POU2F3Q9UKI9 436 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 PLCE1Q9P212 2302 aa10.08□□□□□ -0.8
CASC4-205ENST00000558735 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 FAM234BA2RU67 622 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 A8MV72 311 aaPredicted RBP10.07□□□□□ -0.8
CASC4-205ENST00000558735 GPRIN2O60269 458 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 BMP2P12643 396 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 HOXB9P17482 250 aaPredicted RBP10.07□□□□□ -0.8
CASC4-205ENST00000558735 CDH2P19022 906 aaPredicted RBP10.07□□□□□ -0.8
CASC4-205ENST00000558735 PRPS1P60891 318 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 COPZ1P61923 177 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 HOXC5Q00444 222 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 TGFBR3Q03167 851 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 EGR4Q05215 589 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 LGALS3BPQ08380 585 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 NRF1Q16656 503 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 ZSWIM7Q19AV6 140 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 ZNF311Q5JNZ3 666 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 C6orf10Q5SRN2 563 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 C1orf140Q5VVS0 124 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 SLC2A7Q6PXP3 512 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 GPAT4Q86UL3 456 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms