RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 SPATA9Q9BWV2 254 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 TAPBPLQ9BX59 468 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 POLDIP3Q9BY77 421 aaKnown RBP7.77□□□□□ -1.17
USP3-208ENST00000558285 RTN4RQ9BZR6 473 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 OR10A4Q9H209 315 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SERHL2Q9H4I8 314 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 TMEM185BQ9H7F4 350 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 BCL2L10Q9HD36 194 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 JKAMPQ9P055 326 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 PRELID1Q9Y255 219 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 ERGIC3Q9Y282 383 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 EML6Q6ZMW3 1958 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 C9JVG2 144 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 H3BSA7 217 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 CNOT4O95628 575 aaKnown RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 TGM6O95932 706 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 PSMA4P25789 261 aaKnown RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 CDKN2CP42773 168 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 IDH2P48735 452 aaKnown RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 CASP9P55211 416 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 NFYCQ13952 458 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 CCNIQ14094 377 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 DAZAP2Q15038 168 aaPredicted RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 SYPL1Q16563 259 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 ZNF239Q16600 458 aaKnown RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 COQ5Q5HYK3 327 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 ZNF311Q5JNZ3 666 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 SLX4IPQ5VYV7 408 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 PLEKHM3Q6ZWE6 761 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 GPR141Q7Z602 305 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 ZZZ3Q8IYH5 903 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 SPERTQ8NA61 448 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 C11orf65Q8NCR3 313 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 STEAP2Q8NFT2 490 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 OR9I1Q8NGQ6 314 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 SLC26A7Q8TE54 656 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 SLC38A5Q8WUX1 472 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 FIG4Q92562 907 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 EBF4Q9BQW3 602 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 SLC38A1Q9H2H9 487 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 TMEM38AQ9H6F2 299 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 PARPBPQ9NWS1 579 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 DNAJB12Q9NXW2 375 aaKnown RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 KLHL13Q9P2N7 655 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 PRPF19Q9UMS4 504 aaKnown RBP7.76□□□□□ -1.17
USP3-208ENST00000558285 TRAPPC4Q9Y296 219 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 MYRFQ9Y2G1 1151 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 PCDHB14Q9Y5E9 798 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 NOX1Q9Y5S8 564 aa7.76□□□□□ -1.17
USP3-208ENST00000558285 SETXQ7Z333 2677 aaKnown RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 PCNX1Q96RV3 2341 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 A0A087WXM4 84 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 SH3D21A4FU49 640 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 A6NNC1 897 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 M0QX08 132 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TNFSF13O75888 250 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 NTN1O95631 604 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 PMS2P2O95744 297 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 YES1P07947 543 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TFPTP0C1Z6 253 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 BMP2P12643 396 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ETFAP13804 333 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 PRKAR1BP31321 381 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 IFNA8P32881 189 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 DLX5P56178 289 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CDK6Q00534 326 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 P2RY6Q15077 328 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CDSNQ15517 529 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ANKDD1AQ495B1 522 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 MRPL2Q5T653 305 aaKnown RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 LPCAT4Q643R3 524 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 POMZP3Q6PJE2 187 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TMPPEQ6ZT21 453 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 GALNT5Q7Z7M9 940 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CDH24Q86UP0 819 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 RANBP3LQ86VV4 465 aaPredicted RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 ZNF100Q8IYN0 542 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 DPP10Q8N608 796 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 HIPK4Q8NE63 616 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ANGPTL6Q8NI99 470 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 RNF128Q8TEB7 428 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 NUDT8Q8WV74 236 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 NINJ1Q92982 152 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 STARD4Q96DR4 205 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CMTM5Q96DZ9 223 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TMEM19Q96HH6 336 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ADGRG7Q96K78 797 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 MROQ9BYG7 248 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 PAIP1Q9H074 479 aaKnown RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 CLEC4MQ9H2X3 399 aaPredicted RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 PLSCR4Q9NRQ2 329 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TMEM181Q9P2C4 612 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ZNF443Q9Y2A4 671 aaPredicted RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 GPR52Q9Y2T5 361 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TMED7-TICAM2A0A0A6YYA0 188 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 A0A0J9YW62 118 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ANKRD34BA5PLL1 514 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CDHR4A6H8M9 788 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ZNF724A8MTY0 619 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms