RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 MCRIP1C9JLW8 97 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 FKTNO75072 461 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 NKX2-2O95096 273 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 CSF2RAP15509 400 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 HIST1H1CP16403 213 aaKnown RBP14.95□□□□□ -0.02
SHMT2-231ENST00000557433 EPCAMP16422 314 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 VIPR2P41587 438 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 GPR143P51810 404 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 ART1P52961 327 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 DLX5P56178 289 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 HTR4Q13639 388 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 ULK3Q6PHR2 472 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 SYT9Q86SS6 491 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 IZUMO1Q8IYV9 350 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 MOSPD2Q8NHP6 518 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 GRHL3Q8TE85 626 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 SCARB1Q8WTV0 552 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 CNOT9Q92600 299 aaKnown RBP14.95□□□□□ -0.02
SHMT2-231ENST00000557433 RSC1A1Q92681 617 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 MIB2Q96AX9 1013 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 REG4Q9BYZ8 158 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 BEX1Q9HBH7 125 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 TAS2R8Q9NYW2 309 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 FLRT3Q9NZU0 649 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 USP36Q9P275 1121 aaKnown RBP14.95□□□□□ -0.02
SHMT2-231ENST00000557433 PFDN2Q9UHV9 154 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 INSL6Q9Y581 213 aa14.95□□□□□ -0.02
SHMT2-231ENST00000557433 PIN1P1O15428 100 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 LATO43561 262 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 GPR75O95800 540 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 PAK4O96013 591 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 TIMP1P01033 207 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 TACSTD2P09758 323 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 NAGAP17050 411 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 NUP62P37198 522 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 RAD52P43351 418 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 P2RX1P51575 399 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 DEFB134Q4QY38 66 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 ALG10BQ5I7T1 473 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 RGS7BPQ6MZT1 257 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 PWWP2BQ6NUJ5 590 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 FBXO42Q6P3S6 717 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 FCRLAQ7L513 359 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 OR4N5Q8IXE1 308 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 RFLNBQ8N5W9 214 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 DNAAF1Q8NEP3 725 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 SDR9C7Q8NEX9 313 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 OR4K13Q8NH42 304 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 C1orf216Q8TAB5 229 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 ZNF707Q96C28 371 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 SGTBQ96EQ0 304 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 OR2A5Q96R48 311 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 ZNF69Q9UC07 566 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 TRPM6Q9BX84 2022 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 RP2O75695 350 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 ZNF432O94892 652 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 HIST1H2ABP04908 130 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 CXCL2P19875 107 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 GABRA3P34903 492 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 FGL2Q14314 439 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 PRICKLE4Q2TBC4 344 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 HES5Q5TA89 166 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 PXDC1Q5TGL8 231 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 ZC3H14Q6PJT7 736 aaKnown RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 HIST3H2AQ7L7L0 130 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 CHMP1BQ7LBR1 199 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 IQCF2Q8IXL9 164 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 OR4E2Q8NGC2 313 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 SYNPRQ8TBG9 265 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 SMAP2Q8WU79 429 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-231ENST00000557433 POF1BQ8WVV4 589 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 HIST1H2ACQ93077 130 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 GFI1Q99684 422 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 PDCD1LG2Q9BQ51 273 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 CHIAQ9BZP6 476 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 NMNAT2Q9BZQ4 307 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 TWSG1Q9GZX9 223 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 OBP2AQ9NY56 170 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 PLEKHM1Q9Y4G2 1056 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 KCNMB2Q9Y691 235 aa14.94□□□□□ -0.02
SHMT2-231ENST00000557433 LRRC72A6NJI9 287 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 ADRB1P08588 477 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 PPP3CBP16298 524 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 S100A11P31949 105 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 ACAA2P42765 397 aaKnown RBP14.93□□□□□ -0.02
SHMT2-231ENST00000557433 SEC61A1P61619 476 aaKnown RBP14.93□□□□□ -0.02
SHMT2-231ENST00000557433 PLAURQ03405 335 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 MPPED2Q15777 294 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 MANEAQ5SRI9 462 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 FIGNL1Q6PIW4 674 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 KANSL1Q7Z3B3 1105 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 PNPLA2Q96AD5 504 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 CTHRC1Q96CG8 243 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 CAPNS2Q96L46 248 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 CCNL2Q96S94 520 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-231ENST00000557433 SEC22CQ9BRL7 303 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 IL21RQ9HBE5 538 aa14.93□□□□□ -0.02
SHMT2-231ENST00000557433 FBXO34Q9NWN3 711 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms