RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TESMINQ9Y4I5 508 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF814B7Z6K7 855 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 NME4O00746 187 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CHP2O43745 196 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 MRPL33O75394 65 aaKnown RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CTAG2O75638 210 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 AKR7A3O95154 331 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 PSMB1P20618 241 aaKnown RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 RPS5P46782 204 aaKnown RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CRYBA2P53672 197 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CDH12P55289 794 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 PSME3P61289 254 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 EGR4Q05215 589 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 SLC17A1Q14916 467 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 MFSD13AQ14CX5 517 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 P2RY6Q15077 328 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 LRRC23Q53EV4 343 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CYBRD1Q53TN4 286 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 ENTPD8Q5MY95 495 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 FAM69AQ5T7M9 428 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 FBXW10Q5XX13 1052 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 STAC2Q6ZMT1 411 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 Q6ZT83 130 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CARM1Q86X55 608 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 TMEM99Q8N816 258 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 STEAP2Q8NFT2 490 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 OR6S1Q8NH40 331 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 LZICQ8WZA0 190 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 ZNF775Q96BV0 537 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 WFIKKN1Q96NZ8 548 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 USB1Q9BQ65 265 aaKnown RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 WFDC6Q9BQY6 131 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 TMEM43Q9BTV4 400 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 POLR2J2Q9GZM3 115 aaKnown RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 PCDHAC1Q9H158 963 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 POLR2J3Q9H1A7 115 aaKnown RBP11.08□□□□□ -0.64
SLIRP-209ENST00000557342 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 ABCD2Q9UBJ2 740 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 TAGLN3Q9UI15 199 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 SH3GLB1Q9Y371 365 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
SLIRP-209ENST00000557342 FAM221AA4D161 298 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 TRAPPC13A5PLN9 417 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 CPSF4LA6NMK7 179 aaKnown RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 FTCDNL1E5RQL4 147 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 CXCR6O00574 342 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 RRP9O43818 475 aaKnown RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 RAMP1O60894 148 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 FZD7O75084 574 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 ADAP00813 363 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 CCKARP32238 428 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 GSK3BP49841 420 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 SELENOWP63302 87 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 NPTX1Q15818 432 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 SFRP5Q5T4F7 317 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 CXorf67Q86X51 503 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 GABRG1Q8N1C3 465 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 OR9K2Q8NGE7 335 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 OR4D11Q8NGI4 311 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 ADAMTS16Q8TE57 1224 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 TMEM45BQ96B21 275 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 SLC25A36Q96CQ1 311 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 KTI12Q96EK9 354 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 MPP4Q96JB8 637 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 KCTD14Q9BQ13 255 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 PTDSS2Q9BVG9 487 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 POLDIP3Q9BY77 421 aaKnown RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 RASSF1Q9NS23 344 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 NDE1Q9NXR1 346 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 C6orf203Q9P0P8 240 aaPredicted RBP11.07□□□□□ -0.64
SLIRP-209ENST00000557342 PRSS50Q9UI38 385 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 FLVCR1Q9Y5Y0 555 aa11.07□□□□□ -0.64
SLIRP-209ENST00000557342 ADGRG4Q8IZF6 3080 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 IGKV1D-42A0A075B6H8 117 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 GMNNO75496 209 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 IL32P24001 234 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 IFNA8P32881 189 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 MNAT1P51948 309 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 ITGADQ13349 1161 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 KRT72Q14CN4 511 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 POU4F3Q15319 338 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 FBXW9Q5XUX1 488 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 TTC33Q6PID6 262 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-209ENST00000557342 CASP12Q6UXS9 341 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 LINC00114Q6XXX2 140 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 GPAT4Q86UL3 456 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 RBM45Q8IUH3 476 aaKnown RBP11.06□□□□□ -0.64
SLIRP-209ENST00000557342 PGAM4Q8N0Y7 254 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 UBE2J2Q8N2K1 259 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 CCDC197Q8NCU1 140 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 BCAS4Q8TDM0 211 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 KISS1RQ969F8 398 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-209ENST00000557342 TAAR8Q969N4 342 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 TPD52L3Q96J77 140 aa11.06□□□□□ -0.64
SLIRP-209ENST00000557342 ASPNQ9BXN1 380 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms